Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1574 ATGATAATGATGAATTCTTTCGCTTCGTATTATCGACGGCTCGTGTTTTGCATTCTTTGCGTCTCTTTGTTTCTGCTGGTGCCGAGGGTTTCTTCAAGCTCACCACCTACTCAACACTCTGATCATGGTAGTTCAGACTCAACCACGGGAAGAACTTTAAGGCAGGAGCAGGGTTCTCATGAAATACATTGCTCTAGAGAAAGAAGTAGAACAGCTTGGAAGATCGTTGAGGAGTATTTGATGCCGTTTGTGGAGAAGGAAAAATATCAAATCTCAAAAAGATGCAGGCTTCACCCTGATAACGATCTATACAGAGATCAGGAGCAACATAAGTTTCATATAGATATCAATGAATGGCAGTGTGGATACTGCAAAAAAAGTTTCTATGAGGAGAAAAATCTGGATCTGCATTTTGACAACAGACACTCCAATTTACTAGATTTGAGTCAACGGAAGTGTTTGGCAGATGTATGTGGAGCACTGCATTGTGACCAAATAATGAATTCTGGGTTGAAAAAGTCAAAATGCAATCCTGCTGCTGCTGCAAGGAATAAACATCTATGTGAGAGCTTAGCCGATAGTTGCTTTCCAGTTAGTGAGGGCCCTACAGCAGGCCGACTTCAAGAATTCTTCTTGCGCCAATTCTGTGATGCGCATACTTGCACTGGAAAGCAAAAACCTTTTTCTAGGGGCCGTAGGAAGAAGATGAATGCTTTATACCTTGTTGTCTCCATTTTAGTAGTGATGATGCTCATACTTTTCTATCTCTACGTTTATTTATATCAGAGAGGGATGAAAAGGGGCACTCAAGTGCTGCGACGCATCTCAGACACGAACCGAAAGAAAAAGCCGTCTTGA 858 0.4184 MIMMNSFASYYRRLVFCILCVSLFLLVPRVSSSSPPTQHSDHGSSDSTTGRTLRQEQGSHEIHCSRERSRTAWKIVEEYLMPFVEKEKYQISKRCRLHPDNDLYRDQEQHKFHIDINEWQCGYCKKSFYEEKNLDLHFDNRHSNLLDLSQRKCLADVCGALHCDQIMNSGLKKSKCNPAAAARNKHLCESLADSCFPVSEGPTAGRLQEFFLRQFCDAHTCTGKQKPFSRGRRKKMNALYLVVSILVVMMLILFYLYVYLYQRGMKRGTQVLRRISDTNRKKKPS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1574 285 MobiDBLite consensus disorder prediction 32 55 - -
Lele28g1574 285 ProSitePatterns Zinc finger C2H2 type domain signature. 121 142 IPR013087 -
Lele28g1574 285 PANTHER ZINC FINGER PROTEIN-RELATED 15 284 - -
Lele28g1574 285 MobiDBLite consensus disorder prediction 32 65 - -
Lele28g1574 285 ProSiteProfiles Zinc finger C2H2 type domain profile. 119 144 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1574 Lele-ChrLele28 13538074 13541587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1574 38 285 C2H2 Transcription Factor Family AT5G63280 60.956 2.94e-109 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele28g1574 None None None