Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1557 ATGTTTGGTCGGAGTTATACAGATCTGTTGGTTCAGATCATAAGGAAAGGCAGAGCAGCTGCGCTGGTGAAGACGGCGGCGGTGGCGGCGGCTGGGGTTGACGGAGGATCCGGGTCGAGGAGGGTTTTAAAAGAGCCGAGGTACCGGGGCGTGAGGAAGAGGCCGTGGGGTAGATTTGCTGCGGAGATCAGAGACCCTGTGAAGAAAGCTCGTGTGTGGCTTGGCACCTTCGATTCTGCCGAAGAAGCCGCTAAAGCCTATGACGCCGCCGCTCTCAAATTCCGTGGACCTAAGGCTAAGACCAACTTTCCGATCAACCCTTCTTCTCTCTCACCTTTCTGTTACCACCACAATAACAACCCCACCGATCCGTTTTTAGATCACAGGTTTGATGCTTCTAATGGCTTCCAGGAGCACCAGATCAATCCTCAGAGACCTACTTCTAGCGGCATGAGCAGCACCGTCGAGTCCTTCAGTGGTCCCCGCCCTCGCTCGATGGCGCTGCCGTTGACCACCACCACCTCCCGTAGATACCCTCGGACGCCGCCCGTCGTGCCAGAGGATTGCCACAGCGACTGCGATTCATCGTCGTCTGTGGTTGATAACGACGGCGATGATATCGCGTCATCGTCCTGCCGGCGGCCTTTCCCCTTCGATCTTAACTTCCCAGCACCGGTCGATGACGATCTTCACTGTACCGATCTGCGTCTCTGA 714 0.5644 MFGRSYTDLLVQIIRKGRAAALVKTAAVAAAGVDGGSGSRRVLKEPRYRGVRKRPWGRFAAEIRDPVKKARVWLGTFDSAEEAAKAYDAAALKFRGPKAKTNFPINPSSLSPFCYHHNNNPTDPFLDHRFDASNGFQEHQINPQRPTSSGMSSTVESFSGPRPRSMALPLTTTTSRRYPRTPPVVPEDCHSDCDSSSSVVDNDGDDIASSSCRRPFPFDLNFPAPVDDDLHCTDLRL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1557 237 FunFam Ethylene-responsive transcription factor 2 47 106 - -
Lele28g1557 237 Pfam AP2 domain 46 96 IPR001471 GO:0003700|GO:0006355
Lele28g1557 237 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 37 203 - -
Lele28g1557 237 MobiDBLite consensus disorder prediction 191 205 - -
Lele28g1557 237 Gene3D AP2/ERF domain 47 106 IPR036955 GO:0003700|GO:0006355
Lele28g1557 237 SUPERFAMILY DNA-binding domain 47 105 IPR016177 GO:0003677
Lele28g1557 237 MobiDBLite consensus disorder prediction 138 179 - -
Lele28g1557 237 CDD AP2 46 106 IPR001471 GO:0003700|GO:0006355
Lele28g1557 237 PRINTS Ethylene responsive element binding protein signature 70 86 IPR001471 GO:0003700|GO:0006355
Lele28g1557 237 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Lele28g1557 237 SMART rav1_2 47 110 IPR001471 GO:0003700|GO:0006355
Lele28g1557 237 MobiDBLite consensus disorder prediction 138 206 - -
Lele28g1557 237 ProSiteProfiles AP2/ERF domain profile. 47 104 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1557 Lele-ChrLele28 13001601 13005227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1557 14 237 AP2-EREBP Transcription Factor Family AT3G20310 56.693 3.92e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele28g1557 AP2 1.3e-15 CL0081