Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1540 ATGGTGATGGCGATGCTGAATTCGATACCCGACGCTGCGAAGAACTTCGCTCACGAGCACGCACAGGTGATACCTATTTCGCTCTTCGTGGCGGTTCTCTGTCTCTGCTTGCTCGTCGGTCACTTGCTAGAAGAATACCGTTGGGTTAATGAATCCATCGTCGCCATTTTAGTTGGATGCATTGCTGGAATGCTACTCTTGTTCATTACCAAGGGGAAGAGTTCTCGCATCCTTACATTCGATGAAGAACTGTTCTTCATATATCTTCTGCCACCCATAATATTCAATGCTGGATTTCAGGTCAAGAAGAAACAGTTCTTTCACAACTTCTTAACTATCATGCTATTTGGGGTGATCGGTGTTTTTATATCAACATCTATTATTGTATCTGGCAGCTGGTGGTTATTTCCCAAGTTAAACTTTATTGGTCTGAGCGTGCAAGATTATCTTGCTATAGGAACAATTTTCTCTTCAACAGATACGGTTTGTACCTTGCAGGTTCTCCATCAAGATGAAACTCCTTTATTATACAGCCTAGTATTTGGAGAAGGAGTGGTAAATGATGCGACATCAGTTGTTCTCTTCAATGCGGTGCAGAAGCTCGATGCTTCCAAAGTTCATGGTGGGGCACTCCATGTCATTGGAAATTTCTTGTATCTTTTCTCCACAAGCACTGCCCTAGGATTCACTGCTGGACTTATCACAGCATACATCCTGAAAGCCTGCAGCTTTGGAAGGCAAGTAACACATTCAAGTGTTCGTGAAATTGCATTGATGGTTTTAATGGCATACCTATCCTACATGTTGGCAGAGCTTCTAGAACTCAGTGGAATCCTCACTGTTTTCTTCTGCGGAATATTAATGTCACACTATGCATGGCATAATGTGACTGAAACTTCAAGAGTCACAACCAGGCATGTCTTTGCGACAATGTCATTTATTGCAGAAACTTTTATATTTCTATATGTGGGTATGGATGCCCTGGACATGGAGAAGTGGAGGATTACCAAATTAAGTTTTGGGAGTTTGATGGGAATTTACAGTTGCTTAATCTTCCTGATATTACTTGGGCGGGCTGCTTTTGTTTTCCCTCTCTCTGCTTTTGCCAATTTTATGAATAGGCGTGCTCATAGAGGCTCAAGAATCACATTTAGGCATCAGTTAATCATTTGGTGGGCTGGACTAATGAGGGGGGCAGTCTCCATTGCTCTGGCTTTCAAACATTTCACATATTCTGGAGTTACATCTGATCCTGTTGACGCAACAATGATCACCAACACCATCATTGTTGTGCTTTTCAGTACATTGGTGTTTGGCTTTCTCACGAAACCACTTATCCGTTATCTTCTTCCACATGGCATGACGAGGAAGAACATCAACCGTCAGGAATCTGGTCCTCCTGTCGTGGACTTGAATCTGCCGTTGCTATCCTTTGAGGAGTCAGCAGCAACCAACATCAGTCGTGCAAAGGAAAGTTTGTCCATGTTAATGGAAAGTCCTGTTTACACCATACATCATTATTGGAGGAGGTTTGATGATGCCTACATGAGACCTATATTTGGAGGCCCTCTTGCTTAG 1578 0.4278 MVMAMLNSIPDAAKNFAHEHAQVIPISLFVAVLCLCLLVGHLLEEYRWVNESIVAILVGCIAGMLLLFITKGKSSRILTFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISTSIIVSGSWWLFPKLNFIGLSVQDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDASKVHGGALHVIGNFLYLFSTSTALGFTAGLITAYILKACSFGRQVTHSSVREIALMVLMAYLSYMLAELLELSGILTVFFCGILMSHYAWHNVTETSRVTTRHVFATMSFIAETFIFLYVGMDALDMEKWRITKLSFGSLMGIYSCLIFLILLGRAAFVFPLSAFANFMNRRAHRGSRITFRHQLIIWWAGLMRGAVSIALAFKHFTYSGVTSDPVDATMITNTIIVVLFSTLVFGFLTKPLIRYLLPHGMTRKNINRQESGPPVVDLNLPLLSFEESAATNISRAKESLSMLMESPVYTIHHYWRRFDDAYMRPIFGGPLA 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1540 525 Pfam Sodium/hydrogen exchanger family 30 446 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele28g1540 525 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele28g1540 525 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele28g1540 525 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele28g1540 525 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele28g1540 525 PANTHER SODIUM/HYDROGEN EXCHANGER 18 520 IPR018422 GO:0006812|GO:0015299|GO:0016020
Lele28g1540 525 Gene3D - 25 452 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1540 Lele-ChrLele28 12507993 12512860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1540 14 523 Antiporters AT5G55470 73.152 0.0 769