Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1530 ATGAACTTACAGGAGGCACACAAAGCTGAAGCAAATTACAAGGATGCCGAAATTTTCAACTCTTGGTTGCTTAAACCTCTTCCCTATTGGTTCTTATTGCATCATGATGATGATAGAAATGTGTATGAGCTTGGGAGGCCACCGGCAAAAACTAAGCTACCAAGCAACAAAACAGTGAGGAGGATTAGGTTTGATACTAGAAATTACTCATGGTGGAGTGAAGCTGGGACTCGCAAAACTAGAAATTTTGATGTGGTGTACAATCCTTCTAATAATGAGCCGGTTTGTACCCAGACATTGTTCAAGAGTGCTATTGTTCAGGTTGATGCAGCACCTTTCAAGCAATGGTATCTCCAACATTATGGTGTTGACATCAGTCACAAGAAGAAGACTATAGCTTCTGCCAAGAAGGAAGGGAAAGAAGGTGAAACTGCAACTGAGGAAGTGAAAGAGCAAACATGTATTGAGAAAACTAGAGAAGCGTTAATAGAACTGGACGTTGGATCCTCTATTGAAGAACAATAA 525 0.4057 MNLQEAHKAEANYKDAEIFNSWLLKPLPYWFLLHHDDDRNVYELGRPPAKTKLPSNKTVRRIRFDTRNYSWWSEAGTRKTRNFDVVYNPSNNEPVCTQTLFKSAIVQVDAAPFKQWYLQHYGVDISHKKKTIASAKKEGKEGETATEEVKEQTCIEKTREALIELDVGSSIEEQ 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1530 174 Gene3D - 47 160 - -
Lele28g1530 174 PANTHER 40S RIBOSOMAL PROTEIN S8 38 160 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lele28g1530 174 Pfam Ribosomal protein S8e 42 114 IPR022309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1530 Lele-ChrLele28 12170007 12171669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1530 42 174 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 57.432 1.92e-42 139