Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1523 ATGGAGAAAAGCTTGGCTTGCACTCTTCTTCTTCCTCTTTTTATCATAGTTTCTGCAGGTGAGTTCTCAGAATCTGAACCTTTCTTCAGTTTCATCAAGGCCATTGATCCACAAAATGCACTTAACATGAACATTGACAAATTGGGTTTTTCTTCATTACATCCATGCTTATTGCTTGATGAGCTCAATGGTATTATAATAAGATGCAACTCAGATTCTTCCAGTATCATAGAAATAAGCCTTCAAAGCGTGAACCTCTCTGGCAAAATCAACGCGGATTCCTTATGTCGGCTTCGAAATCTGCAAAGTGTTAACTTAGCTAAGAATCAAATCAGAGGAAACATTCCTGATTCACTTGCTCACTGCACTAGGTTGATGTATTTAAATCTAAGTTGCAATCAGTTGAGTGGGAATGTACCAAACAAAGCCTTAACAAAACTCAGATTTATCAGAACTTTGGACATCTCAAACAATGATTTTTCTGAAAGAATTAGCAGTAGAAGTGAAAGATCAAATTTAGTTATTAGGAAACTGATGCAATTTACATCAGGATCATCGAGTCCTCCTCCCGATAACAGCGAATCTGAACGCTCCAACAACAAAAAATGGTATGCAGATTGGAAGAAACTAGTACCATTACTGGGTGGTGTTGGATTGTTATTGTTGGCTGTTTTCTTTATGTTCAAGAAGGGACCTAAGGTAAATGAGGAGATGGAGAAGGAGAAAATCCACGAAGAGTCTCCGGTGAAGATTTCGATACAAGAAGACATTGGAGAAGATTTGAAGCTGAATAAGATCAGAGATGCAGAGCTTGTGTTCTTTGTTGAAGAGAACGAAAGGTTCACTCTTGAGGACTTGCTTCAAGCCACAGCTGATATTAGAAGTGAAAGCTTTTGTTGCAGCTTGTATAAAGTAATACTGAAGAATAATATACATTATGCAGTGAAAAGGTTGAAGAATTTGCAGGTTTCTTCTGATGAATTTGGAGAAACATTAAGGCAGGTAAGTAACTTGAAACACCCAAATATTCTTCCCCTTGTTGGATATCGCTCAACCAGTGAAGAAAAATTTCTCATTTACAAATATCAAAGCAATGGAAGTCTGCTATTTCTTCTAAAAGAATACATGCAAGGTAAAAAAGAATTCCCATGGAAACTGAGACTGTGTATAGCAGCTGGAATTGCAAGAGGTTTAGGGTTCATATATCAGAAGACAGAAGGAAGAGAAGAGATCATTCCTCATGGAAACCTGAAGCTTTCAAATATCCTTCTTAATGACAACAATGAACCTCTGATAAGTGAGCATGGATTATCGAAATTCTTAGACCCTAACAGATCATTCTTCTTTGCCTCTCATGGATACACTGCTCCGGAAAACAGTTTGACGGAGAAAAGTGATGTTTATAGTTTTGGAGTAATTCTTCTCGAACTGCTAACTGGAAAAAGCATAGAACTAAACAGTATAGACTTGCCAAGATGGGTCCAATCAATGGTGAGAGAGGAATGGACAGGAGAGGTGTTAGATAAGGGAGTTAGGGAAACTGAATATCAGTGGGCGTTCCCCGTGCTGAACATCGCCCTTTTGTGCGTGTCGCGGGTCCCGAGAAACCGACCGAGCATGGAAGAAGTTTTGGACAGGATTGAGAAAGTCATGCAGGAGTATGAACATGTTCAGATTCTTCTGCAGGATGATCATCAACATGGTTCAACATGTTGCAACAATAGAAACCATGAAGCTTGTTGTTCACTGCACAATATCATACCAGAAACATGGGATTCTCCTGGATCAAATTACTGA 1797 0.389 MEKSLACTLLLPLFIIVSAGEFSESEPFFSFIKAIDPQNALNMNIDKLGFSSLHPCLLLDELNGIIIRCNSDSSSIIEISLQSVNLSGKINADSLCRLRNLQSVNLAKNQIRGNIPDSLAHCTRLMYLNLSCNQLSGNVPNKALTKLRFIRTLDISNNDFSERISSRSERSNLVIRKLMQFTSGSSSPPPDNSESERSNNKKWYADWKKLVPLLGGVGLLLLAVFFMFKKGPKVNEEMEKEKIHEESPVKISIQEDIGEDLKLNKIRDAELVFFVEENERFTLEDLLQATADIRSESFCCSLYKVILKNNIHYAVKRLKNLQVSSDEFGETLRQVSNLKHPNILPLVGYRSTSEEKFLIYKYQSNGSLLFLLKEYMQGKKEFPWKLRLCIAAGIARGLGFIYQKTEGREEIIPHGNLKLSNILLNDNNEPLISEHGLSKFLDPNRSFFFASHGYTAPENSLTEKSDVYSFGVILLELLTGKSIELNSIDLPRWVQSMVREEWTGEVLDKGVRETEYQWAFPVLNIALLCVSRVPRNRPSMEEVLDRIEKVMQEYEHVQILLQDDHQHGSTCCNNRNHEACCSLHNIIPETWDSPGSNY 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1523 598 ProSiteProfiles Protein kinase domain profile. 287 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1523 598 Gene3D Phosphorylase Kinase; domain 1 253 362 - -
Lele28g1523 598 PANTHER OS05G0588300 PROTEIN 8 170 - -
Lele28g1523 598 Gene3D Ribonuclease Inhibitor 36 187 IPR032675 -
Lele28g1523 598 Pfam Leucine rich repeat 99 160 IPR001611 GO:0005515
Lele28g1523 598 SUPERFAMILY L domain-like 69 164 - -
Lele28g1523 598 Pfam Protein tyrosine and serine/threonine kinase 308 546 IPR001245 GO:0004672|GO:0006468
Lele28g1523 598 Gene3D Transferase(Phosphotransferase) domain 1 364 575 - -
Lele28g1523 598 SUPERFAMILY Protein kinase-like (PK-like) 301 556 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1523 Lele-ChrLele28 12081539 12083930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1523 81 550 Receptor kinase-like Gene Family AT4G23740 33.532 1.02e-63 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele28g1523 PK_Tyr_Ser-Thr 4.5e-23 CL0016