Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1520 ATGGATGGTGCTAACCACTCGGCTTCGCAGCTTCAGCCTTCGGATTCCGACGATGTGGCATTTAACGATCTGACTCAGCTCGGGTCGCGGCAGAATTCGGACGCCGGAGCATCTGCCTCTGTCAGTGGAGGTGCCCGGTACAAGCTGATGTCGCCGGCTAAGCTTCCGATCCCGAGGTCGCCCTGTATTACGATACCTCCCGGTCTGAGTCCGACATCGTTTCTGGAGTCCCCGGTGCTTTTATCCAACATGAAGGTGGAGCCCTCGCCAACAACAGGGTCTCTCACTAAGCCTCAAGCAGTGTATGGTTCTGTCACTTCTGCAACATTTCCTGTAACGACTATAAGCTCAAATACCAATACTGTCAATGACCGAAAATCTGGCTTCTTTGACTTTAAACCACGCTGTAGCACAGATATGGTTCATGCTGATTTTAACAACCATGTAATAAGTGAGCGGTCCAGGCAAATAGATGGTCCAGGCCATCTTCAATTATATGCCTCATCAACATTAGTTAAAACTGAGACAGCAGTGCCATCAAATAAATTGAGTCTATCTTCGGCGGTTCAAATGGTTAGTTCAAATACTACTGCTCCTGTTGAAGTTGATTTGGATAAACTTAACCAGAAAGGCAATGCCACCCCTGGGCTTCAAGCATCTTTAGTTGATGGTAGAGGCAATGGTCTTCCAGTTGCAGCTGAGAGAATATCAGATGATGGATACAATTGGAGAAAATACGGCCAGAAACATGTTAAGGGATGTGAATTTCCACGCAGCTACTACAAATGCACGCACCCAAATTGTGAAGTAAAAAAGTTATTTGAACGCTCTCATGATGGGCAAATAACAGAGATAATTTATAAGGGAAAACATGATCATCCTAAACCTCAACCAAGCCGTCGATACTCTGCTGGTACTGTTATGTCTATACAAGAAGAGAGAACTGACAAGGCTTCATCAGCCAGCCAAGATGACAAATCATCCAATATGCATGCTCTGGTGCCTCACATGGCTGAACCCAACAGTAACCCAGATCAATCTCCCATACCTGCTGATAGTCCAGAGGGTGTTGGATTAGGGTCAAATAGGGTTAATGATGAGGTTGATGATGATGATGATCCCTTCTCAAAGAGAAGCAAAATGGACTATGGAAATGCTGACATCACTCCTATAATTAAGCCAATACGGGAACCACGGGTGGTCGTACAAACACTAAGTGAGGTTGACATATTGGATGATGGTTACCGCTGGCGTAAGTATGGACAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACGAATGTCGGTTGCCCTGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCCAAAGCGGTAATAACCACCTATGAGGGTAAACACAATCACGACGTGCCTACTGCGAGGAGCACAAGCCATGACACGGCGGGACCAACAATTGCTGCTGGTGGGCAGACAAGAAATAGACCGGAAGAAAGTGATAATATTAGCCTTGACCTTGGGATGGGCATTAGATCAGCTGCTGAAAATATACCAAACAGACAAGGGCAATTGCTGGTTTCTGAATTCGGGAACGGTCAAACTCACCCCGGCAATTCCAGTCTCAAATTTGTTCATAACACCGCTGCTCCGGCATACTTCAGTGTTCTTAATAATGGCTCAAATACATATGGTTCTAGAGAAAATCTGCGTGATGGTCCACCTTTGAACCATTCCTCGTATCCGTGCCCTCCGAACATGGGAAGAATACTAACTGGTCCGTGA 1779 0.4604 MDGANHSASQLQPSDSDDVAFNDLTQLGSRQNSDAGASASVSGGARYKLMSPAKLPIPRSPCITIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLTKPQAVYGSVTSATFPVTTISSNTNTVNDRKSGFFDFKPRCSTDMVHADFNNHVISERSRQIDGPGHLQLYASSTLVKTETAVPSNKLSLSSAVQMVSSNTTAPVEVDLDKLNQKGNATPGLQASLVDGRGNGLPVAAERISDDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGKHDHPKPQPSRRYSAGTVMSIQEERTDKASSASQDDKSSNMHALVPHMAEPNSNPDQSPIPADSPEGVGLGSNRVNDEVDDDDDPFSKRSKMDYGNADITPIIKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSTSHDTAGPTIAAGGQTRNRPEESDNISLDLGMGIRSAAENIPNRQGQLLVSEFGNGQTHPGNSSLKFVHNTAAPAYFSVLNNGSNTYGSRENLRDGPPLNHSSYPCPPNMGRILTGP 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1520 592 FunFam WRKY transcription factor 33 398 464 - -
Lele28g1520 592 MobiDBLite consensus disorder prediction 1 40 - -
Lele28g1520 592 Pfam WRKY DNA -binding domain 412 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g1520 592 Pfam WRKY DNA -binding domain 238 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g1520 592 Gene3D WRKY domain 398 464 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele28g1520 592 Gene3D WRKY domain 231 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele28g1520 592 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 144 495 IPR044810 GO:0003700
Lele28g1520 592 SUPERFAMILY WRKY DNA-binding domain 235 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele28g1520 592 SMART WRKY_cls 411 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g1520 592 SMART WRKY_cls 237 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g1520 592 SUPERFAMILY WRKY DNA-binding domain 403 471 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele28g1520 592 MobiDBLite consensus disorder prediction 467 499 - -
Lele28g1520 592 MobiDBLite consensus disorder prediction 563 592 - -
Lele28g1520 592 ProSiteProfiles WRKY domain profile. 406 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g1520 592 MobiDBLite consensus disorder prediction 474 496 - -
Lele28g1520 592 FunFam WRKY transcription factor 229 297 - -
Lele28g1520 592 MobiDBLite consensus disorder prediction 1 39 - -
Lele28g1520 592 MobiDBLite consensus disorder prediction 302 329 - -
Lele28g1520 592 MobiDBLite consensus disorder prediction 286 382 - -
Lele28g1520 592 ProSiteProfiles WRKY domain profile. 232 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1520 Lele-ChrLele28 12003763 12011145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1520 50 592 WRKY Transcription Factor Family AT4G26640 55.054 0.0 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele28g1520 WRKY 3.4e-25 CL0274