Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1518 ATGCAGACATCACAGAAACATGAGATTTTCCATGGCTCAGTGAAAACTCTGGAATCATATCACTCTTCCTTACTTCAAACTATAGAATCTTGCTCGACATGTAACAGCGATCGTGGCCTTAGTTCTCCATCAACTAATGGAAGCCCAGTACTAAAGACACAATATTCTCTTGAATCTTGCTTGACACTGACACAAGACATCGATGACCTCAGCCACAAGCTACGCGAGTTGGAGACCGTGATGTTGGGACCTGATGCGGAAATTTCAGTTATATATGATGCTGATGCAGAGAAGTGGAAAAAGACAATGGAGATGATATCTAGAGGAGACTTGAAAGAGATGCTTTGTGCTTGTGCATATGCGATGGCGGAGAATGATATGGAAACAAGCGAATGGCTGATATCCGAGCTGCGAGAAATGGTATCCATTTCTGGGAATCCTCTACAACGTTTAGGAGCATACGTGTTAGAGGCTCTTGTGGCTAGATTGTCTTCTTCGGGAAGCAAAATATGCAAATCCTTAAAATGCAAAGAACCTAATGCTTCTGAACTCTATTCATATATGAATAAATTATACGAAATCTGCCCATACTTCAAATTTGGGTATTTATCAGCAAATGGGGCAATTGCTGAAGCCATGAAGCAGGAGAATAGGGTTCATATAATTGATTTTCAGATAAATCAAGGCATCCAGTGGGTGAGTCTCATTCGAGCTCTAGCCTGCCAACCTGGAGGGCCCCCAGAGATTAGAATAACCGGTGTTGATGACTCCACTTCAGCTTTTGTCAGAGGAGGAGGCCTTGAGATTGTGGGGAAAAGGTTATCAGCACTTGCACAATCATGTCATGTTCCATTTCAGTTCCTTGTGGTGCAAGTTTCTGCATCTGATGTTGACTTCAAACACCTTGAGATTCTACCTGGTGAAGCCATTGCTGTGAACTTCACCATGATGTTGCACCATCTTCAAGATCAGACAATAGATCGTCTGTTGAGATTAGTGAATTGCTTGCGTCCCAAGGTAGTAACCCTTGTTGAGCAAGAAAACGAAACCAATCTTGTCCCTTTCTTCCCTCGTTTTGTTCAGACATTTAACTACTACTTGCCTGTTTTTGAATCGATCGATGATGTCATGCCGAGGGATCATAGGGACAGGATCAACGTGGAACAACATTGTTTGGCTCAAGAGATAGTGAACTTGATAGCATGCGAAGGGGAAGATAGAGTGGAACGACACGAGACTCTAGAAACTTGGAAATCACGTTTCAGAATGGCAGGATTTAGTCCATATCCATTGAGCTCATTCATCAATTTTACCATCAAGAATCTTCTGGAGGACTATTCCAGAAACTACACTCTACAAGAGAAAGATGGTGCTCTATACCTTGGTTGGATGAATCAACCTCTTGTTTCCTCTTGTGCTTGGATGTGA 1428 0.4244 MQTSQKHEIFHGSVKTLESYHSSLLQTIESCSTCNSDRGLSSPSTNGSPVLKTQYSLESCLTLTQDIDDLSHKLRELETVMLGPDAEISVIYDADAEKWKKTMEMISRGDLKEMLCACAYAMAENDMETSEWLISELREMVSISGNPLQRLGAYVLEALVARLSSSGSKICKSLKCKEPNASELYSYMNKLYEICPYFKFGYLSANGAIAEAMKQENRVHIIDFQINQGIQWVSLIRALACQPGGPPEIRITGVDDSTSAFVRGGGLEIVGKRLSALAQSCHVPFQFLVVQVSASDVDFKHLEILPGEAIAVNFTMMLHHLQDQTIDRLLRLVNCLRPKVVTLVEQENETNLVPFFPRFVQTFNYYLPVFESIDDVMPRDHRDRINVEQHCLAQEIVNLIACEGEDRVERHETLETWKSRFRMAGFSPYPLSSFINFTIKNLLEDYSRNYTLQEKDGALYLGWMNQPLVSSCAWM 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1518 475 Pfam GRAS domain family 112 474 IPR005202 -
Lele28g1518 475 ProSiteProfiles GRAS family profile. 102 475 IPR005202 -
Lele28g1518 475 Coils Coil 60 80 - -
Lele28g1518 475 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 91 469 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1518 Lele-ChrLele28 11980976 11982403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1518 42 474 GRAS Transcription Factor Family AT5G48150 58.797 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele28g1518 GRAS 1.4e-123 CL0063