Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1514 ATGGGGACTTCAGAAAAACGAAAAATATCCTCTCGTGAATCCATTCATGATCTACTAAAGCGGAAAGTTTTGATTCCTGAAGCTGACAGCTGCTATCTGAAGTCTGAGACATTACTTTTTCCCCCCCATTTCTTTTATATTTCCGAAGCACCCACTTTGAAGCTTCACATGCAGGACTCTCAAGTGATCCACCATAATCTTCATCAAATGGAGCTTCTTGATTCCTCAAAGTTGGCAATTTTCCTCCAACCCGTTTTCACTCATGGGCTTTCTTGTTCACTGCACCTGGCGTTGCTACTTGTGTTACTGATAACATGGGCATGTCAGAAAGCCAAGGGAAGGCATAGGGAAAGTGAAAGAATAGGAGTTTACAATACTGGTGTTTTGTACTACAGAAAGATTCTTCTCTGTTGTTTAGTTGTTTGTGCTTTTAACCTTGTTTTGTCCTTACTTAACTACTTTTACTGGTATAAGAATGATAGCTCTGATGAGATTGTTATTACTGTGGATTTTGTGATGAAAACTGTTGCCTGGGGTGTTCTTTGTGTCTATTTGCATTCTAGACACTCAAGTTCAGGGGAACAAGACTTTCCCAGATTCTTGAGAATTTGGTGCTGGGCTTACTCCTTTGTTTTCTGTTCTTGCCTTGTAATAGACTTTGTGCTCTATAGAAAACATATTTTCCTCCCAATAATATACCTTGTTTCTGATACCGGTTCCGCTCTCTCGGGCCTGTTTCTCTGTTATGTGGGATTTTCAGCAAGCAATGAGACAAAAAGTGCCCTTCTTGAAGAACCCCTTTTAAGTAGTGATTCTAGGGAGAGCCATAGCTATGAGTCCTATAAGAACACCCCATATTCAAAAGCTGGATTTTTCAGTATTGTTACTTTCTCATGGATGAGTCCTCTAATTGCTGTTGGATATAAGAAGACTTTAGGCCTTGAGGACCTCCCTTTGCTCTCTAGTCATGACAGCGTATATGGGACGTTTCCAACTTTCAGAAACAACCTTGAATCAGAATGTAGTGATGATCTTAGCAGAGTGACAACTCTTAAACTGGTGAAGGCTTTAATCTTCTCAACATGGAAAGGGATTCTTTTATCAGGTTTATTTGCATTCTTATACACTTGTGCTTCTTATGTTGGTCCCTTTCTGATTGACATCTTTGTTGAATATCTAAATGGAGAAGAAAGCTTTAAGAATGAGGGTTATGTTTTGGCAATGTCATTTTTTGGTGGAAAGCTTGTGGAGTGCCTTTCACAGAGGCACTGGATGTTTAGGTTCCAGCAAGTTGGGATTAGGTTTCAATCAATGTTGGTGGCGATGATCTACGCGAAAGGGTTGACCCTTTCTAGTCAATCAAAGGAGGGTCAAACCACTGGTGAAACTGTCAACTTAATGACTGTTGATGCTGCTAGGATTGGTGAGTTTTGTTGGTACATGCATGATCCATGGATGGCTGTTGTACAAGTAACTTTAGCTTTAATTATTCTATATAGAAGTGTTGGGCTTGCTTCATTATCTGCTTTTGCTGCTACTGTTTTAATGATGTTGGCAAACTTGCCATTGGGGTCAATGCAAGAGAAGTTTCAGAGAAAGTTAATGGAGTCAAAAGACACAAGAATGAAGGTCACCTCTGAGATTCTAAAGAACATGAGGATCCTAAAGCTGCAAGCATGGGAGATGAAGTTTCTGTCAAGAGTTATCGAAATTAGGAACACTGAGACAGGATGGCTAAAGAAATTTCTATTCAGTTCAGGAATGACTAGATTTCTCTTCTCTTCTGCCCCAACTTTCATCGCTATGGTTACTTTTGGTACTTGTATTCTCATAGGAATCCCACTTGACTCAGGTAAGATATTAGCTGCATTGGCCACTTTCAGAATTCTGCAGCAGCCCATATACAACCTTCCTGACACAATCTCAATGATAGCACAAACTAAGGTTTCCCTCGATCGGATTGCATCATACCTTTGTCTCGAGGAATTGCAGTCCGATGTTGTAGAGAGGCTTCCTCGTGGTAGTTCTGTTACAGCAATTGAGATAGTAGATGGGAATTTCTCTTGGGATTTGTCTTCACATGTTCCTACATTGCAAAATATAAACATCAGCATACTCCATGGCTTCAGGGTTGCAATTTGTGGTACTGTTGGTTCAGGAAAGTCAAGTTTACTCTCTTGTATTCTTGGAGAAGTTTCAAAGCTCTCTGGGACAGTTAAGGTTTCTGGGACAAAGGCTTATGTTGCTCAGTCCCCTTGGATACAAGGTGGAAATATAGAAGAGAACATACTATTTGGGAAAGAGATGGATAGGGAAAAATATGAGAAGGTTCTAGAAGCATGTTCCTTGAAAAGAGACCTTGAAATTCTTCCCTTTGGCGATCAAACTGTTATTGGAGAGAGAGGTATCAATTTGAGTGGTGGACAGAAGCAAAGAGTACAAATAGCTCGTGCTTTATACCAAGATGCTGATATATATCTTCTTGATGATCCTTTCAGTGCTGTGGATGCCCATACAGGATCCCACCTCTTTAAGGAGTGTTTGCTTGGCCTTTTGAGTTCAAAAACAGTGTTATATGTGACTCATCAAGTAGAGTTCTTACCTGATGCTGATCTAATATTGGTCATGAGAGATGGAAAGATGACTCAATCAGGTAAATACAGTGACATACTCAACTCAGGCACTGATTTTATGGAGCTTGTAGGTGCACATAGAGAAGCCTTATCTGCAATCAATTCATCATTAGAAAGAAAACCCACCTTTAAAGAAATTAATACCACTGTGAATGAGACAGACTCATTAACTGCGTTCGGCCTTGAGGAAAACGTTGAAAAAAAAAATGTTCAAAAAGATGATGATGATGATGATGATGGTGGGCCAAAAGGCCAGCTAGTTCAAGAAGAAGAAAGAGAAAAGGGCAAAGTTGGGTTTGAAGTTTACTGGAAATACATCACAACAGCATATGGAGGAGCTCTTGTACCCTTCATATTACTCTTGCATGTGCTTTTTCAGGTTTTTCAAATTGGGAGTAATTATTGGATGGCATGGGCAGCTCCTGTATCAGCAACTACTGAGCCTCCTGTTGTTGGGAGCTTTACACTTTTGCTTGTCTATGTTGTTTTGGCAATTGGAAGTTCTTTCTGCAACCTTGCTAGAACAATGCTGCTTTTTGTAGCTGGATATAAGACAGCCACCACACTCTTCAATAAATTGCATATGTGCTTCTTTCGAGCCCCTATGTCGTTTTTTGATTCTACACCAAGTGGACGAATCCTAAACAGAGCTTCCACTGACCAAAGCGCTGTAGACATGAGCATTCCAATTTTAGTTGGAGGAGTTGCCTTCTATCTTATTCAGCTTTTGGGAAATATTGCTGTGATGTCTCAAATTGCATGGCAGGTTTTCTTAGTATTTATTCCTGTGGTTGCAGCTTGCATATGGTACCAGCGATATTACTCAGAATCGGCACGAGAATTATCCCGTTTGGTTGGTACATGTGAAGCTCCAGTTATACAGCATTTTTCTGAAACCATATCTGGAACAATGACCATTAGAAGTTTTGACCAAGAAGCAAGATTTCAGGACATGAACATGAAACTGATAGATAGATATTCCAAGCCCAAGTTATACACTACCACTGCAATGGAATGGCTTTGCTTCAGATTGGATATGTTATCTTCTATCACATTTGCGTTCAGTTTGGTTTTCTTGATATCTTTTCCAAATGCAATTAGTGTTCCTGGCATCGCCGGCTTGGCTGTGACATATGGGTTTAATCTAAACATGCTGCAAGCTGCATTAATTTGGACGCTTTGCAATATGGAGAATAAAATTATATCAGTAGAAAGAATATTTCAGTATACTAACATCCCAAGTGAGCCTCCTCTTGTAATAGAAGAAAACAGACCAGATTGTTCATGGCCATCATCTGGGGAGGTTCATATCCAGGATTTACAGGTCCGATATGCTCCTCACTTGCCTCTTGTGTTGAGAGGTCTTACATGCACATTCAATGCTGGAGGAAAAACAGGTATTGTAGGGAGAACTGGAAGTGGAAAGTCAACTCTGGTGCAAACACTATTCAGACTCATTGAACCTACATTTGGTCAGATACTAATAGATGGCATTGGTATCTCTTCGATTGGGCTTCATGATTTAAGGTCTAGACTTAGTATTATTCCTCAAGATCCAACTATGTTTCAAGGGACTGTAAGAAGTAATCTAGACCCACTTGAAGAGTACACTGATGAACAGATTTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGAAGTCAGGAAGAAGGATGGAAAGCTTGATTCCATTGTTACTGAGAATGGAGAAAATTGGAGCATGGGTCAGAGGCAACTGGTCTGTCTCGGTCGAGTTCTACTTAAAAAAAGGAAGATTTTGGTGCTTGATGAAGCTACTGCATCAGTTGATACTGCTACAGATAACATCATTCAACAAACCCTGAAGCAGCATTTCTCAGAATGTACAGTTATAACCGTTGCACACAGAATAACTTCCATCCTTGATAGTAACATGGTTTTGGTTCTGAGCCAAGGGCTTATTGAGGAATATGATTCACCAAAAAGATTGCTGGAGAACAAATCTTCTTCTCTTGCTCAACTAGTTGCAGAATACACTCGCAGGTCGAACTTGGGTTTTGAAACTTAG 4680 0.4015 MGTSEKRKISSRESIHDLLKRKVLIPEADSCYLKSETLLFPPHFFYISEAPTLKLHMQDSQVIHHNLHQMELLDSSKLAIFLQPVFTHGLSCSLHLALLLVLLITWACQKAKGRHRESERIGVYNTGVLYYRKILLCCLVVCAFNLVLSLLNYFYWYKNDSSDEIVITVDFVMKTVAWGVLCVYLHSRHSSSGEQDFPRFLRIWCWAYSFVFCSCLVIDFVLYRKHIFLPIIYLVSDTGSALSGLFLCYVGFSASNETKSALLEEPLLSSDSRESHSYESYKNTPYSKAGFFSIVTFSWMSPLIAVGYKKTLGLEDLPLLSSHDSVYGTFPTFRNNLESECSDDLSRVTTLKLVKALIFSTWKGILLSGLFAFLYTCASYVGPFLIDIFVEYLNGEESFKNEGYVLAMSFFGGKLVECLSQRHWMFRFQQVGIRFQSMLVAMIYAKGLTLSSQSKEGQTTGETVNLMTVDAARIGEFCWYMHDPWMAVVQVTLALIILYRSVGLASLSAFAATVLMMLANLPLGSMQEKFQRKLMESKDTRMKVTSEILKNMRILKLQAWEMKFLSRVIEIRNTETGWLKKFLFSSGMTRFLFSSAPTFIAMVTFGTCILIGIPLDSGKILAALATFRILQQPIYNLPDTISMIAQTKVSLDRIASYLCLEELQSDVVERLPRGSSVTAIEIVDGNFSWDLSSHVPTLQNINISILHGFRVAICGTVGSGKSSLLSCILGEVSKLSGTVKVSGTKAYVAQSPWIQGGNIEENILFGKEMDREKYEKVLEACSLKRDLEILPFGDQTVIGERGINLSGGQKQRVQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLGLLSSKTVLYVTHQVEFLPDADLILVMRDGKMTQSGKYSDILNSGTDFMELVGAHREALSAINSSLERKPTFKEINTTVNETDSLTAFGLEENVEKKNVQKDDDDDDDGGPKGQLVQEEEREKGKVGFEVYWKYITTAYGGALVPFILLLHVLFQVFQIGSNYWMAWAAPVSATTEPPVVGSFTLLLVYVVLAIGSSFCNLARTMLLFVAGYKTATTLFNKLHMCFFRAPMSFFDSTPSGRILNRASTDQSAVDMSIPILVGGVAFYLIQLLGNIAVMSQIAWQVFLVFIPVVAACIWYQRYYSESARELSRLVGTCEAPVIQHFSETISGTMTIRSFDQEARFQDMNMKLIDRYSKPKLYTTTAMEWLCFRLDMLSSITFAFSLVFLISFPNAISVPGIAGLAVTYGFNLNMLQAALIWTLCNMENKIISVERIFQYTNIPSEPPLVIEENRPDCSWPSSGEVHIQDLQVRYAPHLPLVLRGLTCTFNAGGKTGIVGRTGSGKSTLVQTLFRLIEPTFGQILIDGIGISSIGLHDLRSRLSIIPQDPTMFQGTVRSNLDPLEEYTDEQIWEALDMCQLGDEVRKKDGKLDSIVTENGENWSMGQRQLVCLGRVLLKKRKILVLDEATASVDTATDNIIQQTLKQHFSECTVITVAHRITSILDSNMVLVLSQGLIEEYDSPKRLLENKSSSLAQLVAEYTRRSNLGFET 1559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1514 1559 Pfam ABC transporter transmembrane region 366 633 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele28g1514 1559 Pfam ABC transporter transmembrane region 1030 1239 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele28g1514 1559 Pfam ABC transporter 698 832 IPR003439 GO:0005524
Lele28g1514 1559 Gene3D - 663 924 IPR027417 -
Lele28g1514 1559 FunFam ABC transporter C family member 10 349 662 - -
Lele28g1514 1559 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 680 903 IPR003439 GO:0005524
Lele28g1514 1559 FunFam ABC transporter C family member 5 957 1294 - -
Lele28g1514 1559 CDD ABC_6TM_ABCC_D1 367 654 IPR044746 GO:0140359
Lele28g1514 1559 Pfam ABC transporter 1330 1478 IPR003439 GO:0005524
Lele28g1514 1559 CDD ABC_6TM_ABCC_D2 993 1288 IPR044726 GO:0140359
Lele28g1514 1559 FunFam ABC transporter C family member 3 1296 1548 - -
Lele28g1514 1559 ProSitePatterns ABC transporters family signature. 805 819 IPR017871 GO:0005524|GO:0016887
Lele28g1514 1559 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 366 646 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele28g1514 1559 SUPERFAMILY ABC transporter transmembrane region 357 661 IPR036640 GO:0005524|GO:0016020
Lele28g1514 1559 SUPERFAMILY ABC transporter transmembrane region 993 1295 IPR036640 GO:0005524|GO:0016020
Lele28g1514 1559 MobiDBLite consensus disorder prediction 945 969 - -
Lele28g1514 1559 FunFam ABC transporter C family member 5 665 912 - -
Lele28g1514 1559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 679 902 IPR027417 -
Lele28g1514 1559 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 286 1547 - -
Lele28g1514 1559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1305 1539 IPR027417 -
Lele28g1514 1559 Gene3D - 1296 1549 IPR027417 -
Lele28g1514 1559 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1313 1547 IPR003439 GO:0005524
Lele28g1514 1559 Gene3D ABC transporter type 1, transmembrane domain 338 662 IPR036640 GO:0005524|GO:0016020
Lele28g1514 1559 Gene3D ABC transporter type 1, transmembrane domain 959 1294 IPR036640 GO:0005524|GO:0016020
Lele28g1514 1559 CDD ABCC_MRP_domain2 1311 1531 - -
Lele28g1514 1559 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 995 1276 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele28g1514 1559 CDD ABCC_MRP_domain1 680 880 - -
Lele28g1514 1559 SMART AAA_5 707 880 IPR003593 -
Lele28g1514 1559 SMART AAA_5 1339 1531 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1514 Lele-ChrLele28 11874960 11882615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1514 676 922 Calmodulin-binding Proteins AT2G36910 30.597 8.37e-27 117