Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1499 ATGGCCACTACTGGTGCAAGGGAGCCCTTGATACCACAATTACCAGATCCAGCAGCTCCAAAAAGAAATGGCCAAGTTAGCAGGAGAAGGTTTCTCCGTTGCAAAAGTGCTCCTCTTGCTAATCTCGATCCACCCGAGAAAACCGACATTGGCTCAATTCAACATTCTGAGTCCATATTTGGGAAGTTACATCCAAATTTTCGACTTGTGGCTATATATCTTGTAGGGTATTTAGGTATTGGAGCTGTGATCTTCTATCTTGTAAGGCACCAGATCTCAGGGAAGAAAACAAAGGGGGTCCTTGATTCAATATACTTTACTATTGTCACGATGACCACAGTTGGATATGGAGACCTTGTGCCAAATAGTGACCTTACAAAACTACTTGCATGTGCTTTTGTCTTCACAGGAATGGCACTTGTTGGTTTAATCTTAAGCAAAGCAGCAGACTACTTGGTTGAGAAGCAGGAAGTTTTGCTAGTCAAAGCTCTGCATAGGAATGGTCCAACTCAAGTTCTAAAGGAGGTTGAGGTCAACAAGACAAGATATAAATTTTATGTTGTATTTTTCCTTCTTTTGGTGCTCATCGTTGCGGGGACAATTTTCTTAGTTGCCATTGAGAAGTTGGATGTTATCAGTGCCTTCTATTGTGTTTGTTCTACAATAACAACCCTGGGTTATGGGGATAAAAGCTTCTCAAGTGAAGGAGGAAGGGTCTTTGCTGTGTTTTGGATATTGACAGGTACTATTTGTTTAGGTCAGCTTTTCCTTTACATTGCTGAGCTGAACACTGAAAGGAGACAAAAGGAAATCACTGAGATGGTTCTTAATCGGAGGACAACCAATGCAGACTTGGAGGCAGCAGATATTGATGATGATGGAAAAGTTGGGGTTGCTGAGTTCATTATCTATAAGCTCAAAGAGATGGGGAAGATAAGTCAAGAAGATATCTCACTGGTAATGCAAGAGTTTGAGGAGCTTGATTTTGATCAATCTGGTACTCTTTCACCTTCTGATATAACTCTTGCTCAAGCACCTCCTCCATCTTAG 1050 0.4133 MATTGAREPLIPQLPDPAAPKRNGQVSRRRFLRCKSAPLANLDPPEKTDIGSIQHSESIFGKLHPNFRLVAIYLVGYLGIGAVIFYLVRHQISGKKTKGVLDSIYFTIVTMTTVGYGDLVPNSDLTKLLACAFVFTGMALVGLILSKAADYLVEKQEVLLVKALHRNGPTQVLKEVEVNKTRYKFYVVFFLLLVLIVAGTIFLVAIEKLDVISAFYCVCSTITTLGYGDKSFSSEGGRVFAVFWILTGTICLGQLFLYIAELNTERRQKEITEMVLNRRTTNADLEAADIDDDGKVGVAEFIIYKLKEMGKISQEDISLVMQEFEELDFDQSGTLSPSDITLAQAPPPS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1499 349 SUPERFAMILY Voltage-gated potassium channels 179 278 - -
Lele28g1499 349 PRINTS Two pore domain K+ channel signature 109 137 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele28g1499 349 PRINTS Two pore domain K+ channel signature 223 232 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele28g1499 349 SUPERFAMILY EF-hand 248 341 IPR011992 -
Lele28g1499 349 Pfam Ion channel 191 262 IPR013099 -
Lele28g1499 349 Pfam Ion channel 72 153 IPR013099 -
Lele28g1499 349 ProSitePatterns EF-hand calcium-binding domain. 328 340 IPR018247 -
Lele28g1499 349 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 66 319 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele28g1499 349 FunFam Calcium-activated outward-rectifying potassium channel 1 64 159 - -
Lele28g1499 349 Gene3D - 169 289 - -
Lele28g1499 349 ProSitePatterns EF-hand calcium-binding domain. 289 301 IPR018247 -
Lele28g1499 349 Gene3D - 64 158 - -
Lele28g1499 349 SUPERFAMILY Voltage-gated potassium channels 65 167 - -
Lele28g1499 349 MobiDBLite consensus disorder prediction 1 26 - -
Lele28g1499 349 FunFam Two-pore potassium channel 1 165 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1499 Lele-ChrLele28 11373613 11375303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1499 44 344 Ion Channels AT5G55630 64.474 8.31e-142 404