Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1494 ATGGGAAGCTTCACGGAGATGCAGATGCAGGAGGAATTCATCTTCCGAAGCCCTTATTACGGGGTTGTCACGGTTCCAGATAACGTGACATTGCCGGAGTTTGTGCTTCACAACTCGGAGTTGTACGCCGACAAGGTGGCGTTCGTGGAGGTTGGGAGCGGGAAGGCAATAACACACGGCCAAGTGGCGAGGGACACACAGAGGTTTGCGAAGGCGTTGAGATCTTTGGGTGTGAGGAAAGGGCATGTCGTGATTGCTGTACTTCCTAATGTTGCTGAGTATGCGATTGTTGCGTTGGGGATTATGTCGGCCGGCGCGGTGTTTTCCGGCGCCAATCCGGCAGCCCATGCTTCGGAAATCAAGAAGCAGGCTGAGTCTGCTGATGCCAAGCTAAGTGTAGGCTTACCGGTGATAGTGCTCGACGACGAGCCCATTGAAGAAGCCATGAACTGGAAGAAGCTTCTAGAAGCATCAGACCGAGCCGGCCAGACTGCTTCCAAAGAACCGATCTCTCAGACCGATCTCTGTGCCCTGCCTTTCTCCTCAGGAACCACCGGACTCTCAAAGGGCGTCATGTTAACTCACAGAAACCTCGTCACCAACCTCTGCTCTACCCTCTTCGGAGTCGAACCGGAGATGATCGGTCAGGAACAAAGGCACGGTGGTGGTCATGGGACGGTTCGAGCTGAGGACTTTTTTAATGCTTTGATCGCTCATGAGGTCAATTTCGCTCCCATCGTCCCTCCCATTATTCTGAACTTGGTTAAGAACCCTGTCGTGGATGAGTTCGATCTCTCCAAGCTCAAGCTTCAGACCGTCCTTACCGCCGCCGCTCCTCTTGCTCCGGAAGTTCTCACGGCGTTTGATAATAAGTTCCCCGGTGTACTTGTCCAACAAGCATATGGACTAACAGAACATAGCTGCATCACACTGAAACATGCACACAAAGGATTAGCTAATTCGAAAAGGAACTCAGTGGGCTTCATCCTCCCTAATATGGAAGTGAAGTTTATTGATCCTGACACAGGCAAGTCCCTGCCGAGGAACACGTCCGGCGAGCTCTGTGTGAGAAGCCAAGCCATCATGCAAGGTTACTACAAGCAGGTGGAAGAGACTGCACAGACAATCGATAAGGATGGGTGGATTCACACCGGAGACGTAGGCTTCATTGATGACGATGACAATGTCTTCATTGTGGATCGTATCAAGGAGTTGATTAAATACAAAGGCTTCCAAGTTGCTCCAACAGAGCTAGAGGTAATTCTTTTATGTCATCCCTCCGTTGAAGATGTTGCTGTCGTCCTAATAGCAGATGAAGAAGCAGGAGAGACGCTAGGTGGGAGCGTGGTGATGAGCGCAGGAGCTAAAGAGAGGGAAGAAGACATAATCAAGTACGTTGCTTCTAATGTTGCCAGTTACAAGAAAGTGAGAGTCCTTCACTTTGTGGATGCCATCCCTAAATCTCCTTCTGGCAAAATCATGAGGGGGCTTGTCAGAGACCGAATGCTCCAAAACATGCCTTCTTCTACTCCATCAAATAACTCTGCCTAA 1551 0.5023 MGSFTEMQMQEEFIFRSPYYGVVTVPDNVTLPEFVLHNSELYADKVAFVEVGSGKAITHGQVARDTQRFAKALRSLGVRKGHVVIAVLPNVAEYAIVALGIMSAGAVFSGANPAAHASEIKKQAESADAKLSVGLPVIVLDDEPIEEAMNWKKLLEASDRAGQTASKEPISQTDLCALPFSSGTTGLSKGVMLTHRNLVTNLCSTLFGVEPEMIGQEQRHGGGHGTVRAEDFFNALIAHEVNFAPIVPPIILNLVKNPVVDEFDLSKLKLQTVLTAAAPLAPEVLTAFDNKFPGVLVQQAYGLTEHSCITLKHAHKGLANSKRNSVGFILPNMEVKFIDPDTGKSLPRNTSGELCVRSQAIMQGYYKQVEETAQTIDKDGWIHTGDVGFIDDDDNVFIVDRIKELIKYKGFQVAPTELEVILLCHPSVEDVAVVLIADEEAGETLGGSVVMSAGAKEREEDIIKYVASNVASYKKVRVLHFVDAIPKSPSGKIMRGLVRDRMLQNMPSSTPSNNSA 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1494 516 Pfam AMP-binding enzyme 39 408 IPR000873 -
Lele28g1494 516 SUPERFAMILY Acetyl-CoA synthetase-like 12 504 - -
Lele28g1494 516 Gene3D - 224 403 IPR042099 -
Lele28g1494 516 Gene3D - 13 221 IPR042099 -
Lele28g1494 516 Gene3D - 404 506 IPR045851 -
Lele28g1494 516 FunFam 4-coumarate--CoA ligase 2 404 505 - -
Lele28g1494 516 Pfam AMP-binding enzyme C-terminal domain 417 492 IPR025110 -
Lele28g1494 516 ProSitePatterns Putative AMP-binding domain signature. 178 189 IPR020845 -
Lele28g1494 516 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1494 Lele-ChrLele28 11324128 11329214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1494 6 503 Monolignol Biosynthesis Gene Families AT1G62940 65.799 0.0 659