Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1490 ATGACCCCCTCCCCCGGCGTCGGCAAGCTGCCTGCTGATGATATGACAAAGACACAGTGCTTTAATCAATATAGGTTGGCGCAAAACCTCACATTCCAATTCCCTTCCTTCACATCACTTCGGAACATCACCCTCGTCGGCGATTCCTTTCTCCGTAACGGCATTCAACCACACTCTTGGGAGCATCGCTATGTGGGTCTCCTCAATTCCTCCCAATTGACCCGATCCAACTTCGTTGCCGTCCAATTCAACCCCAACGATAATCGATTTGAGTTGGATATAAACGGTGTTGCTTCGATCAATGCCACCGATGATACCATCTCACAGGGCATTGATCTCAAGAGTGGAGAATTGATCACAGCTTGGATCAATTACGAGAGTGAAAAGAGGAAGCTTCAAGTGTTTTTGAGTAATAATAATTCGACTTCAAATTTGAAGCCAGAGAACCCGATTCTGAATGTTGATGATCTTGACCTTTCTGGGTATATCAAGGAGATAGCGTACGTGGGATTTGCTGCTTCAGCTGAGGGAAGCACTGAGCTTCATCAGCTTGTGAACTGGAGGTTCCTGAGTAATGGATCTCTTCCTGCAAAGTTTCATGCTCATAACTTTTCTGATAGATGGGTGAGTGCAGCACAGAACGTTCACAATAAGTCCCTTAATAATTCCAGCAGCAAGCATGACAAAAGGCTTGGATTTGGTATAGCCATTGCTGGTCCAGCTTTTTTCTGGGTAGTGCTGGTAAGTTTGGTCTATATTTCTGTACGGAAATGGAGGAATAGCAGAACATTGAAGAGAGTGAAAACTGAGTTAATGGCTTGTCCTAGGGAATTTAGTTACAAAGACTTGAAAGTAGCCACAAAAGGGTTTCACTCAAGTAGGATCTTCGGCCAAGGATCATTTGGTACAATTTATAAAGCTTTGTTTCTACCTTCTGGAACCATTGCTGCCGTGAAAAGATCAAGGCACTCTCATTATGGCAAAACAGAATTTCTAGCTGAATTGTCCGTCATAGCTGGTTTAAGGCACAAGAATCTGGTTCAACTTCAAGGTTGTTGTGTTGACAAGGGAGAACTGTTGCTTGTGTATGAATTCATGCCTAATGGAAGCTTAGATAAGATGCTCTACCAAGAATCTGAAGAAAGCCATGACTTGTTGAACTGGTCTCGTAGACTTAATATTGCTATTGTGTTGGCTTCTGTTCTGACTTATCTCCACCAAGAATGTGAGAAAAGAATTCTCAGCAATGATGAAGCTGCAAGCACACTTTTTGTGCCAAAGGTGAAACCATGCCTTACCTTCTCTTGTGGCCTGCCTTTGAGTCTTGATGAGATTGTTTCAGATAGTAATGTAGAGTTCAATACTGAGAAGTCCTTGTGTGAGATAAGAATTGACTGA 1398 0.4292 MTPSPGVGKLPADDMTKTQCFNQYRLAQNLTFQFPSFTSLRNITLVGDSFLRNGIQPHSWEHRYVGLLNSSQLTRSNFVAVQFNPNDNRFELDINGVASINATDDTISQGIDLKSGELITAWINYESEKRKLQVFLSNNNSTSNLKPENPILNVDDLDLSGYIKEIAYVGFAASAEGSTELHQLVNWRFLSNGSLPAKFHAHNFSDRWVSAAQNVHNKSLNNSSSKHDKRLGFGIAIAGPAFFWVVLVSLVYISVRKWRNSRTLKRVKTELMACPREFSYKDLKVATKGFHSSRIFGQGSFGTIYKALFLPSGTIAAVKRSRHSHYGKTEFLAELSVIAGLRHKNLVQLQGCCVDKGELLLVYEFMPNGSLDKMLYQESEESHDLLNWSRRLNIAIVLASVLTYLHQECEKRILSNDEAASTLFVPKVKPCLTFSCGLPLSLDEIVSDSNVEFNTEKSLCEIRID 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1490 465 Gene3D - 50 192 - -
Lele28g1490 465 SUPERFAMILY Protein kinase-like (PK-like) 271 413 IPR011009 -
Lele28g1490 465 Gene3D Transferase(Phosphotransferase) domain 1 366 433 - -
Lele28g1490 465 Pfam Protein tyrosine and serine/threonine kinase 293 408 IPR001245 GO:0004672|GO:0006468
Lele28g1490 465 SUPERFAMILY Concanavalin A-like lectins/glucanases 77 305 IPR013320 -
Lele28g1490 465 Gene3D Phosphorylase Kinase; domain 1 252 365 - -
Lele28g1490 465 ProSiteProfiles Protein kinase domain profile. 290 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1490 465 Pfam Legume lectin domain 59 195 IPR001220 GO:0030246
Lele28g1490 465 PANTHER - 53 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1490 Lele-ChrLele28 11242913 11247899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1490 64 425 Receptor kinase-like Gene Family AT5G55830 50.000 3.95e-117 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele28g1490 PK_Tyr_Ser-Thr 1.4e-17 CL0016