Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1479 ATGATCCCCTGCATTATTACCACCAGTTTTCTGCTATTCATAGCATCTCAAATTATATTGCCAATTACTGCTGCCATGGCCACTGGTTCAGAGAATGATAGGCTCTCTTTGCTTGCTCTGAAGGACAAGTTAACGAATGGTGTTCCAGAAGCTTTGCCTTCATGGAATGATTCTATCCATTTCTGCAAGTGGCAAGGTGTTACATGCAATCTTCGTCACATGAGAGTCTCAGCTTTGAACTTAACAAATCAAAATTTGGGGGGCATTCTTGCACCAGCATTAGGTAACTTAACCTTTCTCAAACTGCTCAATCTTTCGTATAATGGATTGCATGGTCATATTCCGAAACAAATTGGGCGTCTTAAACGGTTGCAAATTCTCCATTTGAATAAAAATAATCTCCAAGGAGAGATCCCTATAGAGCTGGCCAACTGTTCTAAACTCCAGAAGATTTTCTTTACTTCCAATAATTTGACTGGCAAAATTCCTTTTTGGTTAGGATCTATGCGACAACTTACAGTGTTGGCAATTGGTACAAATGAATTTCATGGAAATATTCCACAATCGTTGGGAAATCTTTCTTCTTTGGAGCGTTTGTCTCTTTCGTATAATAATTTGGAAGGAAGTATACCTCCATCTCTAGGTAGGTTGTCGAATTTGTACGTGCTCTATCTTGGTGACAACAATCTTTCTGGAATAATCCCTTCTTCACTTTATAATCTTTCTCGCATGGACGATTTAGATTTTCCTTCCAACTATTTGTCTGGAACTATTCAATCAAATATTGGCCTTGCTTTCCCAAATCTTCGATATTTTAATTTGGGAAACAACATGTTGACGGGAACTATTCCAACTTCATTATCCAACATGTCTCAATTGCAATTGTTTGCAATATATGGAAATTCTTTTTGGGGCCTAGTCCCTATCTCTTTTGGAAGACTAAAGAACCTTCTTGAATTTGATATTGACACAAATAATTTTGGAAGTGAAGAAGGTCATGATCAGGATTTCCTCTCATCGTTAACAAATTGTAGTCAATTGAATACAATAGATATGTCAAGGAATAAATTTAGCGGTGTACTGCCAAATTCAATTGGGAATTTCTCTTCCCAACTTGATAAACTTATTATGCGATCCAATCATATCTTTGGAAGCATACCAAATGAGATTGGGCAACTAGATGGATTAACTTCCCTTGGTTTGCAGTATAACTTCCTTCGAGGCACCATTCCACGTTCAATTGGAAAGCTTGAAAATATTGGAAGGATATACCTAGATCATAATCGATTATCTGGTAGAATTCCTGATATCTTTGGAAATCTTACTAACTTGATTGAACTTTCGTTGTCTTATAATAATTTTGAGGGAACCATTCCAGTAAGCCTCAAGCATTGCAAAGGTATGGAATTCTTGTACATACATCAAAATAACTTGAGTGGTAATATACCAAATCTTACTTTTGGTTACCTAGAAAGCTTAGTACATCTTTTCTTGTCTTCCAATTCCTTGATTGGTCCTATTCCATCAGATATTGGTAACATGAAGCATTTAGTGGGACTAGATCTCAGTAATAACAATTTTTCTGGTGATATTCCAACGGAACTTGGGGAATGCTTACAGTTGACAGATCTTGATATGAGCAGGAACTTCCTTCATGGAAGTATCCCCTCATCCTTTAGTTCCTTAAAATCTCTCATCAACTTAGACCTTTCCAGCAATAACTTGTCAGGCACAATCCCCCAAGAACTAAAACATTTTCCAATATTGGAGACTTTGGACCTCTCTCACAACCATTTTTATGGTGAGGTTCCAAAAGGAGGAGTCTTTGATAATATCACAGCTATTTCACTCAAAGGAAATGAGAATCTTTGCGGTGGAATACCTCAACTAAAGCTTCCCGAATGCCCAAGAAAGTCGAAGAAGCAATTCAAAGTCATTATCCTTATCATCATGATAAGTGGTGGTCTTACTTGTTTTGCAATTTTCCTAATCATTTTCAAGAGAAGGAAACACAAACAGTCGTCTTCCTCGCCATCTTCTCCACAGAATACTCATTCTAGGGTTTCTTATAAAGAGCTACATGACGCAACCAATGGATTTTCTTCATCCAATTTGGTTGGTGTAGGAACCTTTGGTTCTGTATACAAAGGATCTCTTCAACATTTTGAAACACCTATTGTTGTAAAGGTGCTAAATCTTCAAGCACATGGGGCAACAAGGAGTTTCATCACAGAATGCAAAACTCTCAGTAAAGTCCGGCATAGGAATCTGTTGAAGATATTGACTTCATGTTCAAGCATTGATTACAAAGGCAATGATTTTAAGGCCCTTGTTTTTGAGTTCATGCCTAACGGGAGCTTGGATAATTGGTTGTCAGCGAACGAGCTTGGTGAAACTGGAAATTTGTACTTGAATTTCAGACAAAGATTGGATGTAGCTATTGATGTGGCTCATGCTTTGGATTATCTTCATCATGATTTTGAGGAAACTATTGTTCATTGTGACATTAAGCCAAGTAATGTTCTTCTTAGTGATGATATGGTCGCGCACTTGGGAGACTTTGGATTAGCTAGGCTTCTTCATGAGGTTACAGGCTATTCTGGTGAGGGTCACACTACATCATCATCAATTAAAGGAACAATTGGGTATATTCCTCCAGAGTATGGAGAAAGTGGTCAAGTTACAACACAAGGGGATATTTACAGCTATGGGGTTCTTATGCTAGAGATGCTCACTGGAAAGAAGCCAACAGATAGCATGTTTCATGATGATCTGAACCTACCCAAGTTCTGCAAGTTAGCATTCCCAGACAGAGTCCTTGACATAGTGGATTCAAATTTGTTTATTCTGTCTAACAGAGACCACAGAAAAGTTATGCAGAATTCGAATATGGAACAGAAAATTCAAGAATGCTTTACTTGCTTTACTAGGATTGGAGTGGCATGTTGTACAGAATTACCTAGTGAAAGAATTGGCATAAAAGATGTTATAGCGGAGTTGCTTACGATTAAGCAGCAGCTATCAACTTTCAACATTGTCATATGA 3045 0.377 MIPCIITTSFLLFIASQIILPITAAMATGSENDRLSLLALKDKLTNGVPEALPSWNDSIHFCKWQGVTCNLRHMRVSALNLTNQNLGGILAPALGNLTFLKLLNLSYNGLHGHIPKQIGRLKRLQILHLNKNNLQGEIPIELANCSKLQKIFFTSNNLTGKIPFWLGSMRQLTVLAIGTNEFHGNIPQSLGNLSSLERLSLSYNNLEGSIPPSLGRLSNLYVLYLGDNNLSGIIPSSLYNLSRMDDLDFPSNYLSGTIQSNIGLAFPNLRYFNLGNNMLTGTIPTSLSNMSQLQLFAIYGNSFWGLVPISFGRLKNLLEFDIDTNNFGSEEGHDQDFLSSLTNCSQLNTIDMSRNKFSGVLPNSIGNFSSQLDKLIMRSNHIFGSIPNEIGQLDGLTSLGLQYNFLRGTIPRSIGKLENIGRIYLDHNRLSGRIPDIFGNLTNLIELSLSYNNFEGTIPVSLKHCKGMEFLYIHQNNLSGNIPNLTFGYLESLVHLFLSSNSLIGPIPSDIGNMKHLVGLDLSNNNFSGDIPTELGECLQLTDLDMSRNFLHGSIPSSFSSLKSLINLDLSSNNLSGTIPQELKHFPILETLDLSHNHFYGEVPKGGVFDNITAISLKGNENLCGGIPQLKLPECPRKSKKQFKVIILIIMISGGLTCFAIFLIIFKRRKHKQSSSSPSSPQNTHSRVSYKELHDATNGFSSSNLVGVGTFGSVYKGSLQHFETPIVVKVLNLQAHGATRSFITECKTLSKVRHRNLLKILTSCSSIDYKGNDFKALVFEFMPNGSLDNWLSANELGETGNLYLNFRQRLDVAIDVAHALDYLHHDFEETIVHCDIKPSNVLLSDDMVAHLGDFGLARLLHEVTGYSGEGHTTSSSIKGTIGYIPPEYGESGQVTTQGDIYSYGVLMLEMLTGKKPTDSMFHDDLNLPKFCKLAFPDRVLDIVDSNLFILSNRDHRKVMQNSNMEQKIQECFTCFTRIGVACCTELPSERIGIKDVIAELLTIKQQLSTFNIVI 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1479 1014 Gene3D Ribonuclease Inhibitor 184 331 IPR032675 -
Lele28g1479 1014 Gene3D Ribonuclease Inhibitor 30 183 IPR032675 -
Lele28g1479 1014 Pfam Protein kinase domain 702 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1479 1014 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lele28g1479 1014 SMART LRR_typ_2 266 290 IPR003591 -
Lele28g1479 1014 SMART LRR_typ_2 514 538 IPR003591 -
Lele28g1479 1014 SMART LRR_typ_2 217 240 IPR003591 -
Lele28g1479 1014 SMART LRR_typ_2 393 417 IPR003591 -
Lele28g1479 1014 SMART LRR_typ_2 586 611 IPR003591 -
Lele28g1479 1014 SMART LRR_typ_2 193 216 IPR003591 -
Lele28g1479 1014 SMART LRR_typ_2 441 465 IPR003591 -
Lele28g1479 1014 SMART LRR_typ_2 490 513 IPR003591 -
Lele28g1479 1014 SMART LRR_typ_2 562 585 IPR003591 -
Lele28g1479 1014 SMART LRR_typ_2 97 121 IPR003591 -
Lele28g1479 1014 Gene3D Ribonuclease Inhibitor 332 644 IPR032675 -
Lele28g1479 1014 FunFam LRR receptor-like serine/threonine-protein kinase EFR 670 781 - -
Lele28g1479 1014 Pfam Leucine Rich Repeat 195 216 IPR001611 GO:0005515
Lele28g1479 1014 Pfam Leucine Rich Repeat 268 289 IPR001611 GO:0005515
Lele28g1479 1014 FunFam Leucine-rich repeat receptor protein kinase EMS1 188 266 - -
Lele28g1479 1014 Gene3D Transferase(Phosphotransferase) domain 1 782 1011 - -
Lele28g1479 1014 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 339 1001 - -
Lele28g1479 1014 SUPERFAMILY RNI-like 267 605 - -
Lele28g1479 1014 SUPERFAMILY L domain-like 30 327 - -
Lele28g1479 1014 Pfam Leucine rich repeat 423 478 IPR001611 GO:0005515
Lele28g1479 1014 Pfam Leucine rich repeat 540 599 IPR001611 GO:0005515
Lele28g1479 1014 SUPERFAMILY Protein kinase-like (PK-like) 673 1001 IPR011009 -
Lele28g1479 1014 FunFam Leucine-rich repeat receptor-like protein kinase 30 187 - -
Lele28g1479 1014 ProSiteProfiles Protein kinase domain profile. 700 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1479 1014 ProSitePatterns Protein kinases ATP-binding region signature. 706 729 IPR017441 GO:0005524
Lele28g1479 1014 FunFam LRR receptor-like serine/threonine-protein kinase EFR 333 641 - -
Lele28g1479 1014 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 782 1011 - -
Lele28g1479 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 831 843 IPR008271 GO:0004672|GO:0006468
Lele28g1479 1014 Gene3D Phosphorylase Kinase; domain 1 680 781 - -
Lele28g1479 1014 SMART serkin_6 700 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1479 Lele-ChrLele28 11099906 11103171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1479 31 1006 Receptor kinase-like Gene Family AT3G47570 43.290 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele28g1479 Pkinase 1.5e-38 CL0016