Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1476 ATGGTGCCTTACGGAGCCATCATCAATTTTCTTCTGTGCATAGTTTTACAAACCTCAATGCAAGCTAGACCTTCCATGGCCGTAGGGTCGGAGGAGACTGATAGACTCGCTTTGCTTGCTCTAAAAGATAAGCTAACCAATGGCATTCCAGAAGCTCTACCTTCTTGGAATGATTCTTACCACTTCTGTAAATGGCAAGGTGTTTCGTGCATTCTACCCCAAATGAGAGTCTCTGCTTTGCGTTTGGCACATCAAAATTTTCTTGGCACTCTTGCTCCAGCATTAGGTGGGTTGTCAAATTTGCACTTGCTCTATCTTGTTAACAATAGTCTTTCTGGTATAATCCCCTCTTCACTTTACAACCTCTCTCGCATGGAAGATCTACAGTTGAATTTCAACAACTTGTCTGGAACTATTGCATCAAATATTGGCCTAGCTTTCCCAAATCTTCAAACTTTTAATGTTGGACACAATATGTTGATGGGAACTATTCCAGCTTCATTATACAACATGTCTCAATTGCAATTATTTGCAATATATGAAAATGCTTTTAGCGGCCTTTTCCCTACCTCTTTGGGAAGATTGCAAAACCTTCATACATTTGAAATTTCAACGAATAATTTTGGCAGTGAAGAGGGTCATGACTTGGATTTCCTCTCATCCTTAACAAATTGTAGCCAATTGCATTTAATAGAGATGATGGATAATAAATTTAGCGGTGCATTGCCAAATTCAATTGGCAATCTCTCTTCGCAACTTTATAGGCTTAGTATGAAAACCAATCATATTTTTGGAAGCATACCGAATGAGATTGGGCAACTAGATGGTTTAACTTACCTTGGTTTGGGACATAACTTCTTTCAAGGTACAATTCCACAATCGATTGGAAAGCTTAAAAATCTTGGAAGGTTATTCTTAGAACAAAATCAATTATCTGGTAGAATTCCTGATATCTTTGGAAATCTTACTAAGTTGTTCGAACTTTGGTTGTCAAATAATTATTTTGAGGGAACCATTCCAGTAAGCCTCCAACATTGCAAAGGTATGCAATTGTTGTACATAAATCAAAATAACCTGAGCGGTATTTTACCAAAGCTAACTTTTGGTCATCTAGAAAGCTTAATATATCTTGAAATGTCTTCCAATTCCTTGATTGGTCCCATTCCATCCGAGATTGGTAACATGAAGCAATTAGTGGGATTAAATCTAAGTGAAAACAATTTTTCTGGTGTCATTCCAATGGAACTTGGGGAATGCTTACAGTTGACAGATCTTGATATGAGTGGAAACTCCCTCCATGGAAGTATCCCCTCATCATTTAGCTCTTTAAAATCCCTCACGAATGTAAACCTTTCCAACAATAACTTGTCTGGGACTATCCCCCAAGAACTAAAATATCTTCCAATATTGGAGAGATTGAACCTATCACACAACCATTTTTATGGTGAGGTTCCAAAAGGAGGAGTTTTTGATAATATCACAGCTGTCTCACTCACAGGAAATGAGAACCTTTGTGGTGGAATACCTCAACTGCAGCTACCCATATGCCCAAGTAAGTCGAAGAAGCATTTCAAAGTCATAGTAGTTATCATTGTGATAAGCGGTGTTTTCACTTGTTTTGCAATTTGTTTAATCATTTGCAAGAGAAGAAAACATAAAAAGTTGTCTTCCTCCCCATCTTTCCCACAAAGTACACATTTGAGGGTTTCTTATAAAGAGCTACATGATGCAACCGATGGATTTTCTTCATCCAATTTGGTTGGTGTTGGAAGCTTAGGTTCTGTATACGAAGGAACTCTTCAACAATTTGAAAGACCTATTGCTGTAAAGGTGCTGAATCTTCAAGCACATGGGGCATCAAAGAGTTTTATCACAGAATGCAAAACTCTTAGTAAAGTCCGGCATAGGAATCTTTTGAAGATATTGACTTCATGTGCAAGTGTTGATTACAAAGGCAACGATTTTAAGGCAATTGTTTTTGAGTTCATGCCAAACGGGAGCTTGGACAATTGGTTGTCAGCAAACGAACTTGGTGTACCAAGAAATTTTAATATGAATTTCAGGAAAAAATTGGATATAGCTATTGATGTGGCTCATGCTTTGGACTACCTTCATCATGATTTTGACGAAACTATTGTTCATTGTGACATCAAGCCAAGTAATGTTCTTCTTAGTGATGATATGGTCGCACACTTAGGAGACTTCGGATTAGCTAGGCTTCTTCATGAGGTTACAAGCTATTCTGGTGAGGGTCAAACTACATCCTCAGCAATTAAAGGAACTATTGGGTATATTCCTCCAGAGTATGGAGAAAGTGGCCAAGTCACGACGCAAGGAGATATCTACAGCTATGGAGTTCTTATGCTAGAGATGCTCACTGGAAAGAAGCCAACAGATATCATGTTTGGTGAGGATCTAAGCCTACCCAAATTCTGCAAGTTAGCATTGCCAGATGAAGTCTTTGAGATAGTTGATTCAAGTTTGCTTGTTCTAACTGATAGAGACTACAAGAACATTATGCAAAATCCAGATTTCGAATGTAAAATTCAAGAGTCCTTTGCTAGCTTTGCTTGGATTGGAGTGGCATGTTGTGCAGAATTGCCTGGTGAACGAATGAACATAAAAGATGTTTTAGTAGAGTTGCTTGCAATTAAACAAAAGTTATCCACTCTCAACATTGTCATATGA 2688 0.3802 MVPYGAIINFLLCIVLQTSMQARPSMAVGSEETDRLALLALKDKLTNGIPEALPSWNDSYHFCKWQGVSCILPQMRVSALRLAHQNFLGTLAPALGGLSNLHLLYLVNNSLSGIIPSSLYNLSRMEDLQLNFNNLSGTIASNIGLAFPNLQTFNVGHNMLMGTIPASLYNMSQLQLFAIYENAFSGLFPTSLGRLQNLHTFEISTNNFGSEEGHDLDFLSSLTNCSQLHLIEMMDNKFSGALPNSIGNLSSQLYRLSMKTNHIFGSIPNEIGQLDGLTYLGLGHNFFQGTIPQSIGKLKNLGRLFLEQNQLSGRIPDIFGNLTKLFELWLSNNYFEGTIPVSLQHCKGMQLLYINQNNLSGILPKLTFGHLESLIYLEMSSNSLIGPIPSEIGNMKQLVGLNLSENNFSGVIPMELGECLQLTDLDMSGNSLHGSIPSSFSSLKSLTNVNLSNNNLSGTIPQELKYLPILERLNLSHNHFYGEVPKGGVFDNITAVSLTGNENLCGGIPQLQLPICPSKSKKHFKVIVVIIVISGVFTCFAICLIICKRRKHKKLSSSPSFPQSTHLRVSYKELHDATDGFSSSNLVGVGSLGSVYEGTLQQFERPIAVKVLNLQAHGASKSFITECKTLSKVRHRNLLKILTSCASVDYKGNDFKAIVFEFMPNGSLDNWLSANELGVPRNFNMNFRKKLDIAIDVAHALDYLHHDFDETIVHCDIKPSNVLLSDDMVAHLGDFGLARLLHEVTSYSGEGQTTSSAIKGTIGYIPPEYGESGQVTTQGDIYSYGVLMLEMLTGKKPTDIMFGEDLSLPKFCKLALPDEVFEIVDSSLLVLTDRDYKNIMQNPDFECKIQESFASFAWIGVACCAELPGERMNIKDVLVELLAIKQKLSTLNIVI 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1476 895 SUPERFAMILY L domain-like 251 506 - -
Lele28g1476 895 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 663 893 - -
Lele28g1476 895 SUPERFAMILY Protein kinase-like (PK-like) 559 881 IPR011009 -
Lele28g1476 895 Gene3D Phosphorylase Kinase; domain 1 542 662 - -
Lele28g1476 895 SMART serkin_6 581 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1476 895 Gene3D Ribonuclease Inhibitor 212 525 IPR032675 -
Lele28g1476 895 Gene3D Ribonuclease Inhibitor 149 208 IPR032675 -
Lele28g1476 895 SMART LRR_typ_2 298 321 IPR003591 -
Lele28g1476 895 SMART LRR_typ_2 322 345 IPR003591 -
Lele28g1476 895 SMART LRR_typ_2 147 171 IPR003591 -
Lele28g1476 895 SMART LRR_typ_2 443 466 IPR003591 -
Lele28g1476 895 SMART LRR_typ_2 122 146 IPR003591 -
Lele28g1476 895 SMART LRR_typ_2 98 121 IPR003591 -
Lele28g1476 895 SMART LRR_typ_2 467 492 IPR003591 -
Lele28g1476 895 Gene3D Transferase(Phosphotransferase) domain 1 663 892 - -
Lele28g1476 895 FunFam LRR receptor-like serine/threonine-protein kinase EFR 551 662 - -
Lele28g1476 895 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Lele28g1476 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 712 724 IPR008271 GO:0004672|GO:0006468
Lele28g1476 895 SUPERFAMILY RNI-like 76 316 - -
Lele28g1476 895 Gene3D Ribonuclease Inhibitor 33 144 IPR032675 -
Lele28g1476 895 PANTHER OS04G0122200 PROTEIN 97 886 - -
Lele28g1476 895 FunFam LRR receptor-like serine/threonine-protein kinase EFR 214 522 - -
Lele28g1476 895 Pfam Protein kinase domain 583 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1476 895 ProSiteProfiles Protein kinase domain profile. 581 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1476 895 Pfam Leucine rich repeat 421 480 IPR001611 GO:0005515
Lele28g1476 895 Pfam Leucine rich repeat 276 334 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1476 Lele-ChrLele28 11000761 11004020 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1476 77 887 Receptor kinase-like Gene Family AT3G47570 43.289 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele28g1476 Pkinase 5.4e-39 CL0016