Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1446 ATGCAGATACGGGGTATGCATACCCTGATACGTGATTCCCAAATAAAAACGCATGATTTCGTATTTTATTCTGACCGTTTGATTCGTCTGGTTGTTGAACATGGCCTGGGACATCTACCATTTACAGAAAAGCAAGTAATCACTCCGACTGCACTTGTGCGTGTCTGTGACCAAGGTCTGTGTACACTGGTGTCGATTTCTGTAAGGCTATGTGGAGTCTCTGTTGTCAGGAGTGGCGAGAGTATGGAGAATGCTTTAAGAGCATGCTGTAAAGGCATCAAGATTGGCAAAATTCTTATTCATAGAGAAGGGGAAGGGGATAACAGTCAGCAGCTGATATATGAAAAATTGCCTAATGATATCTCGGATAGGCACGTGTTACTGTTGGATCCCATACTAGGCACAGGAAATTCGGCTGTTCAAGCAATTTCTTTACTCATAAAAAAGGGCGTGCCAGAGTCCAACATCATATTTCTCAATCTCATATCAGCACCCCAAGGTGTGCATGTGGTCTGCAAAGCCTTTCCCAAAATAAAAATCGTGACATCCGAGATCGAGTTGGGCCTGAATAAAGACTTCCGTGTTGTACCGGGCATGGGCGAGTTTGGGGACCGGTATTTTGGCACAGATGATGATCAGCAGGTGGTGGCCCCTTCACAGTAG 663 0.451 MQIRGMHTLIRDSQIKTHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTALVRVCDQGLCTLVSISVRLCGVSVVRSGESMENALRACCKGIKIGKILIHREGEGDNSQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIKKGVPESNIIFLNLISAPQGVHVVCKAFPKIKIVTSEIELGLNKDFRVVPGMGEFGDRYFGTDDDQQVVAPSQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1446 220 Pfam Uracil phosphoribosyltransferase 2 209 - -
Lele28g1446 220 SUPERFAMILY PRTase-like 2 210 IPR029057 -
Lele28g1446 220 CDD PRTases_typeI 70 182 IPR000836 -
Lele28g1446 220 FunFam Probable uracil phosphoribosyltransferase 1 209 - -
Lele28g1446 220 Gene3D - 1 209 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1446 Lele-ChrLele28 10617288 10619549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1446 1 212 PRT Gene Family AT4G26510 82.547 1.92e-121 351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g1446 28 10617288 10619549 Lele01g1275 01 7758477 7761096 CCT
Lele28g1446 28 10617288 10619549 Lele02g1544 02 19487811 19489898 CCT
Lele28g1446 28 10617288 10619549 Lele03g1288 03 7732177 7734688 CCT
Lele28g1446 28 10617288 10619549 Lele04g1532 04 20337990 20339898 CCT
Lele25g1432 25 10530172 10538425 Lele28g1446 28 10617288 10619549 hybridization
Lele26g1461 26 10370562 10379590 Lele28g1446 28 10617288 10619549 hybridization