Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1441 ATGGGAGATTCCGCGTACAGAGTGGAAACGACCTCTCGTCTCGCCCAATGGAGAATCGACAACTTGGGTTCCAGTACTTACCGTAGGTCCGATCCTTTCAAGATTGGCATCTGGAACTGGCATTTGGTTCTAGAAAAGAACCGGGCTATGTTGGTTAGGTTATACCCAGAAATGAACAATCTTTCCAGAGAAAAACCACCCATTGTATCTCTAATCTTAAGGGTTGTTAATTCTTCTGGAGATCGCAAGGCCTTGGCTCATTCAGAAATTAAAGACAAACTGATCAAGCCCAATGAAGACTTCGTTTGGGCAATTGAGGTCCCACAAACTGGAAAATTCATTATTGACGTTGAGTTCCTGGATTTAAAGACGGCAGCATCCTCCAAGGATGAACCGTGCTCCATCTGGGATGATCAAGTTATGCAGAAAACCTCAAATGTAACAGCCCTTCAATCACTTGGTCGAATGCTAGCAGAACACATCCACACAGACATCACGATAAATGCTGCAGATGGAAGCATCCAGGCCCATCGTGCTGTTCTTGCGGCCCGATCACCTGTCTTCAGCAGTATGTTCTCATATAATCTGAAGGAGAAAGAGTTATCTGCCATAGACATCCCAGACATGTCAGTTGAAGCTTGCCAAGCTTTTGTCAATTATCTTTATGGGAACATCAAGCATGAAGAATTTCTGGCACATCGGTTAGTCCTTCTGCATGCAGCTGATAAGTATGACATATCTGACTTGAAAGAGGCATGCCATCAGAGTCTTCTCAAAGATATTGATTCAAAAAATGTACTTGAGAGACTCCAAAATGCATATTTATATGAATTGCCAGAATTGAAGATGAGCTGTATGCAATATCTTGTGAAATTTGGTAAATTATATGACATTCGAGACGATTTCAAAGAATTCGTGCAATATGCAGACAGGGATCTGATTGCTGAAATCTTCAATGAAATCATCACTTCCTGGAAAGGATTCTGA 987 0.4195 MGDSAYRVETTSRLAQWRIDNLGSSTYRRSDPFKIGIWNWHLVLEKNRAMLVRLYPEMNNLSREKPPIVSLILRVVNSSGDRKALAHSEIKDKLIKPNEDFVWAIEVPQTGKFIIDVEFLDLKTAASSKDEPCSIWDDQVMQKTSNVTALQSLGRMLAEHIHTDITINAADGSIQAHRAVLAARSPVFSSMFSYNLKEKELSAIDIPDMSVEACQAFVNYLYGNIKHEEFLAHRLVLLHAADKYDISDLKEACHQSLLKDIDSKNVLERLQNAYLYELPELKMSCMQYLVKFGKLYDIRDDFKEFVQYADRDLIAEIFNEIITSWKGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1441 328 Gene3D Potassium Channel Kv1.1; Chain A 136 291 IPR011333 -
Lele28g1441 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Lele28g1441 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Lele28g1441 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Lele28g1441 328 SUPERFAMILY POZ domain 148 259 IPR011333 -
Lele28g1441 328 Pfam BTB/POZ domain 157 259 IPR000210 GO:0005515
Lele28g1441 328 PANTHER OS08G0495500 PROTEIN-RELATED 5 327 IPR044714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1441 Lele-ChrLele28 10548325 10550265 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele28g1441 BTB 2.7e-21 CL0033