Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1435 ATGATCTTTCTTTGCGCCATCCTTAAGGTTTGTTCAAGTGTTCTAGAAGATTCACACCAAAAACCTACTCCTACCAGAAATATTCTTCCGATTTTACCCTTCTCAATGTCTCAAGCCCTCAATTTCCCTCTCCCCGCCGGCCGGCCACTCAGTTCTTCCTCATCCTCGGCCTCATCACTGAGATTTCTCCGGCGTCTACCTGTGAAGTCCTCAAAGGAGTGCAGAGCTTCGATCGGCGCTGTCGCGACGGAGGCCGATCCGGCAGTGATTGATTCTCGGCGGCCATTGAGTCTCTATGAGGTGCTCCGAGTGAACCAGAATGCGTCTCCGACGGAAATCAAGTCAGCGTATAGGAATTTGGCCAAGCTGTACCATCCTGATTCGGCCGTGCGCCAATCAGAATCAGACGCAAGGGACTTCATCGCGATCCACAACGCCTATGAGACGCTCTCCGATCCGTCGGCTAGAGCACAGTATGATCTCTCGTTGATGGCTTCTCGCCGGAGGAGGCGTCCGTATCTGTCGTCGATGCAAGATCGCTCTTCCGGATTCTATACGACCCGAAATTGGGAGACGGATCAATGCTGGTAG 591 0.5279 MIFLCAILKVCSSVLEDSHQKPTPTRNILPILPFSMSQALNFPLPAGRPLSSSSSSASSLRFLRRLPVKSSKECRASIGAVATEADPAVIDSRRPLSLYEVLRVNQNASPTEIKSAYRNLAKLYHPDSAVRQSESDARDFIAIHNAYETLSDPSARAQYDLSLMASRRRRRPYLSSMQDRSSGFYTTRNWETDQCW 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1435 196 PRINTS DnaJ domain signature 135 155 IPR001623 -
Lele28g1435 196 PRINTS DnaJ domain signature 99 117 IPR001623 -
Lele28g1435 196 PRINTS DnaJ domain signature 117 132 IPR001623 -
Lele28g1435 196 Gene3D DnaJ domain 92 183 IPR036869 -
Lele28g1435 196 Pfam DnaJ domain 98 160 IPR001623 -
Lele28g1435 196 ProSiteProfiles dnaJ domain profile. 97 163 IPR001623 -
Lele28g1435 196 SUPERFAMILY Chaperone J-domain 95 164 IPR036869 -
Lele28g1435 196 SMART dnaj_3 96 155 IPR001623 -
Lele28g1435 196 ProSitePatterns Nt-dnaJ domain signature. 140 159 IPR018253 -
Lele28g1435 196 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 36 196 - -
Lele28g1435 196 CDD DnaJ 99 152 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1435 Lele-ChrLele28 10464939 10465798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1435 99 160 C2H2 Transcription Factor Family AT1G74250 46.970 1.52e-09 54.7