Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1433 ATGCCGCGTGCAAAACTAGTAAACTCATTCTTGCTTTGCCTAACGGTCAGACTTGGAGCCAACAGGCGAGTTCTTGCGAGAAGGAGACAGAGAAATCAAATGGGCGACGAGATGATTCAGAGTACGCCATTGATTTCTCATGCTTCTTCGGATTCAGGACACGACAACTTTGACAGAACAGGGACTACATGGAGTGCGGTGGCGCACATAATAACGGGAGTGATAGGGGCAGGGGTGCTGTCACTGGCATGGGCGACCGCTCAGCTTGGGTGGATCGCAGGTCCATTGTGCATCATACTGTTCGCAATCACAACCCTTGTTTCTGTATACCTCGTTGCTGATTGCTATAGATACCCTTATCCTGAGACTGGACCCATTAGGAACCGCTCCTTCATTGATGCTGTCAAGCTCTACTTAGGGGAGAGAAATAAAAAGGTGTGCACAATATTGGTGAACGAGAGCCTTTGTGGCACGACCATTGCCTACGTCATTACAACTGCTTCCAGTGTCAGGGTGAAGGTGAAAGAAACTTATCCTTACAGGGCATTAGACATGGCAGTCCAAAACTCCCTCCAAATAACTTCTTCTTCTTCATCTTCTTGTGCTTATGATGATGATGGACATGCCAAAAGAACTGGAACTGTATGCAGTGCAGTGTCTCATATTGTTACTGCTGTTATTGGTTCTGGTGTTCTGTCTCTGGCTTGGAGTATTTCTCTGTTGGGTTGGATTGCAGGGCCTGTTTCCTTGCTTTTCTGTGCTACTGTCACTTATATTTCTTCCTGCCTCCTTTCTGATTGTTACAGATCTCTTGATAGTGTTTCTGGCAACAGAAACTACTCTTATATGGATGCTGTTAGAACTTATCTTGGACAAAAACGTACATGGTTGGCTGGTTTCTGTCAATATTTGAACTTGTATGGGATTAGTATCGCCTACGTTATTACCACAGCAACTAGTCTGAGGGCAATTCTGAAGTCAAACTGTTATCACAAGTATGGCCACCATGCTCCTTGTCACTCTGGGGAAACCTTGTTCATGGTGGTGTTTGGAGTTGTGCAATTCTTCATGTCATTCATACCAGATCTTCATAATATGGCCTGGCTTTCAGTTCTTGCTGCAACTATGTCATTTTCATATTCTTTCATTGGACTAGGGCTTGGCATGGCAAAAGTTATTGAAAATGGGACAATTAAGGGCAGCATAACAGGAGTAGCAACTAGTAACTCTGTTGAAAAACTATGGTTAGTGTTCCAAGCAATTGGTGATGTCGCCTTCGCCTATCCATACTCAATCATTCTTCTTGAAATACAAGATACATTGAAGTCTCCCCCACCTGAAAATCAGACCATGAAGAAGGCTTCCATGATATCAGTCCTTGTCACAACCTTCTTCTACCTTTGTTGTGGAAGCTTCGGATATGCTGCATTCGGAAGCGATACGCCGGGAAATTTATTGACAGGCTTCGGCTTCTACGAGCCTTACTGGCTTGTTGACTTGGCTAATGCTTGCATTGTTGTTCATCTGGTGGGAGGATATCAGATATTCAGTCAACCAATATTTGCAGCTGTTGATAGATACACTTCTAGAAGGTTCCCAAACAGTAACTTTGTGAACAAATTTTACCGAGTGAAAATCCCTCTATTGCCTACGTTTCAGCTGAGTTCGTTCAGGCTTTGTTTCAGAACAGTATATGTGATTTGCACCACAGGCATAGCCATTCTCTTCCCTTACTTCAACCAAGTCCTTGGAGTTTTAGGAGCTTTGAACTTTTGGCCACTCACCATTTACTTCCCTGTGGAGATGTACTTTGTGCAGAAGAAAATTGGGGCTTGGACTAAAAAATGGATTCTTCTTAGATCCTTTAGTTTTGTTTGCTTTGTTATAAGTGTTTTGGGATTTGTTGGGTCTATTGAAGGAATCATCAAGGAGAAACTCAGCTCATAG 1947 0.4335 MPRAKLVNSFLLCLTVRLGANRRVLARRRQRNQMGDEMIQSTPLISHASSDSGHDNFDRTGTTWSAVAHIITGVIGAGVLSLAWATAQLGWIAGPLCIILFAITTLVSVYLVADCYRYPYPETGPIRNRSFIDAVKLYLGERNKKVCTILVNESLCGTTIAYVITTASSVRVKVKETYPYRALDMAVQNSLQITSSSSSSCAYDDDGHAKRTGTVCSAVSHIVTAVIGSGVLSLAWSISLLGWIAGPVSLLFCATVTYISSCLLSDCYRSLDSVSGNRNYSYMDAVRTYLGQKRTWLAGFCQYLNLYGISIAYVITTATSLRAILKSNCYHKYGHHAPCHSGETLFMVVFGVVQFFMSFIPDLHNMAWLSVLAATMSFSYSFIGLGLGMAKVIENGTIKGSITGVATSNSVEKLWLVFQAIGDVAFAYPYSIILLEIQDTLKSPPPENQTMKKASMISVLVTTFFYLCCGSFGYAAFGSDTPGNLLTGFGFYEPYWLVDLANACIVVHLVGGYQIFSQPIFAAVDRYTSRRFPNSNFVNKFYRVKIPLLPTFQLSSFRLCFRTVYVICTTGIAILFPYFNQVLGVLGALNFWPLTIYFPVEMYFVQKKIGAWTKKWILLRSFSFVCFVISVLGFVGSIEGIIKEKLSS 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1433 648 PANTHER OS05G0424000 PROTEIN-RELATED 63 172 - -
Lele28g1433 648 Pfam Transmembrane amino acid transporter protein 211 642 IPR013057 -
Lele28g1433 648 Pfam Transmembrane amino acid transporter protein 59 171 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1433 Lele-ChrLele28 10411931 10424195 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1433 203 644 Organic Solute Cotransporters AT5G09220 54.607 0.0 533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1283 01 7814677 7815156 Lele28g1433 28 10411931 10424195 CCT
Lele02g1555 02 19562744 19563223 Lele28g1433 28 10411931 10424195 CCT
Lele03g1298 03 7809170 7810690 Lele28g1433 28 10411931 10424195 CCT
Lele04g1544 04 20414858 20415337 Lele28g1433 28 10411931 10424195 CCT
Lele25g1420 25 10307304 10310737 Lele28g1433 28 10411931 10424195 hybridization
Lele26g1448 26 10214712 10219788 Lele28g1433 28 10411931 10424195 hybridization