Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1419 ATGGCAAAGGGTTGCGCCACCAACACATATGAAGAGGCTCGGAAGCAACGGCTTGAAGAAAACAAAAAAAGATTTGAGGATCTGGGGATTTCAAAGATTTCAAAAAATTTATCTGAACTTGTCACACCAGAGAAGAAGGCTCCTCCGCAACGTCGACCAAAACAAAAATCAAATAGTAATGATGTCGTGGAACCAAGACGCTCTTCTCGTGTGCGAAATTCTGTTCCTTCATATCGTGAGGAGGTATTCATGGACCTTCCACCTTTGCGGAAGAGGTCGAGGTCGTCTTCAACATCTTGGGGAAGTTACGTTGCAAGGCCACTAGAAGAAATTAAAGAAGCCACAGATGAAGAAAGAAATCGTGCTTTCATGGCTGCAGAATCACTCTTAAGCGATTTACAGACTTCAAATCCAACATTTATCAAGTCAATGGTCCGGTCTCATGTTTATAGTTGCTTTTGGTTGGGTCTGCCTACTAGATTTTGCCAAGATCATCTTCCAAAGACTGCGTGTGACATGATTTTAGAGGATGAAAATGGCTCAGAATTTGAGGCTGTTTTCCTTGGCAATAGAACTGGGATTAGTGGAGGCTGGAGAGGATTTGCATTGGATCATAAGTTGGATGATGGTGATGCACTGGTTTTTGAATTGGTTGAACCTATAAGATTTAAGATTTACATTGTGAAAGCCTTTCCAGAATCAGCTGAAAATGGAGAGGAGATTTTGGAGGAACAAGCTGATACTTGTGCAACCAAGAAGCACAAATCACAACCAAACGAGACACAAATTCCTAAAGTATCTGCAAATTCTCAGGAACACAAAGCAGAAAATAACGTTGACAATGAAATCGAGCCACAAGGGCCAAACACAACCAGGAAAACTAGGTTTTCTCAGAGAAAATCTCAGAATGAATATAAAGATTGTAGACTGCTTCCTTCTGATGATTCAATAAAGGAAGAAAATATTGAAGAGGGGAAAAATTTTACCACTGAGAAAGCAAATTCTCAAGCAAACAAAAGAAGGTCAAAACGTGGTACACGAAAATAA 1047 0.4021 MAKGCATNTYEEARKQRLEENKKRFEDLGISKISKNLSELVTPEKKAPPQRRPKQKSNSNDVVEPRRSSRVRNSVPSYREEVFMDLPPLRKRSRSSSTSWGSYVARPLEEIKEATDEERNRAFMAAESLLSDLQTSNPTFIKSMVRSHVYSCFWLGLPTRFCQDHLPKTACDMILEDENGSEFEAVFLGNRTGISGGWRGFALDHKLDDGDALVFELVEPIRFKIYIVKAFPESAENGEEILEEQADTCATKKHKSQPNETQIPKVSANSQEHKAENNVDNEIEPQGPNTTRKTRFSQRKSQNEYKDCRLLPSDDSIKEENIEEGKNFTTEKANSQANKRRSKRGTRK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1419 348 MobiDBLite consensus disorder prediction 282 296 - -
Lele28g1419 348 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 36 230 IPR044837 -
Lele28g1419 348 MobiDBLite consensus disorder prediction 297 327 - -
Lele28g1419 348 SUPERFAMILY DNA-binding pseudobarrel domain 134 229 IPR015300 -
Lele28g1419 348 MobiDBLite consensus disorder prediction 36 74 - -
Lele28g1419 348 Coils Coil 8 28 - -
Lele28g1419 348 SMART B3_2 140 231 IPR003340 GO:0003677
Lele28g1419 348 CDD B3_DNA 138 229 IPR003340 GO:0003677
Lele28g1419 348 MobiDBLite consensus disorder prediction 45 68 - -
Lele28g1419 348 Gene3D - 114 231 IPR015300 -
Lele28g1419 348 MobiDBLite consensus disorder prediction 249 348 - -
Lele28g1419 348 MobiDBLite consensus disorder prediction 255 274 - -
Lele28g1419 348 ProSiteProfiles B3 DNA-binding domain profile. 140 231 IPR003340 GO:0003677
Lele28g1419 348 Pfam B3 DNA binding domain 140 223 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1419 Lele-ChrLele28 10251685 10254986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1419 10 230 B3 DNA Binding Superfamily AT5G58280 50.598 6.61e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele28g1419 B3 4.2e-15 CL0405