Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1410 ATGTTGCCCGTATCCAACATAAAGATAGATGGTCAAAATATCCAGGATGTTACCCTTGATAGTCTTCGGAAGTCTATTGGTGTTGTTCCACAAGATACGGTCTATAAAGCTGCTCAACAAGCAGCAATTCATGACACTATCATGAATTTTCCTGAAAGATATTCAACCGTTGTGGGAGAGCGAGGACTCAAGGTGACAGCATTTCCTGATAACTGCATCTACTGTGTTAAACTTTCCTTGGATGGCTTTCTTGCACAGTTAAGCGGTGGTGAGAAGCAACGTGTTGCCTTGGCTCGTGCGTTTTTGAAAGCACCTCCAATTCTGTTATGTGATGAAGCTACGAGTGCACTTGACAGCACAACAGAAGCAGAGATATTAAATGCTTTGAAATCCTTAGCAAATAATCGCACTTCCATATTCATTGCTCACAGGCTTACTACTGCAATGCAGTGTGATGAGGTTGCCTCTTCCTTATATGTCCTTACTACTATCATAGTGTTGGAAAATGGAAAGGTGGTTGAACACGGACCACATGAACTGCTCTTATCTAGGGTGGGAAGATATGCACAACTTTGGGCCCAGCAAAATAACACGGTTGATGCCGCAGCAATGAAAGCCGGGGCGTAA 627 0.4338 MLPVSNIKIDGQNIQDVTLDSLRKSIGVVPQDTVYKAAQQAAIHDTIMNFPERYSTVVGERGLKVTAFPDNCIYCVKLSLDGFLAQLSGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEVASSLYVLTTIIVLENGKVVEHGPHELLLSRVGRYAQLWAQQNNTVDAAAMKAGA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1410 208 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 6 191 IPR039421 -
Lele28g1410 208 Pfam ABC transporter 6 115 IPR003439 GO:0005524
Lele28g1410 208 Gene3D - 4 206 IPR027417 -
Lele28g1410 208 ProSitePatterns ABC transporters family signature. 87 101 IPR017871 GO:0005524|GO:0016887
Lele28g1410 208 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 2 194 IPR003439 GO:0005524
Lele28g1410 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 195 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1410 Lele-ChrLele28 10173381 10176545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1410 7 198 Calmodulin-binding Proteins AT2G36910 35.185 1.20e-28 110