Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1409 ATGGTATCAGGTATACTGGCTTACAAATTTGGAGCACCTTTTGCATTGATCACATCCTTATCAGTTGCTGCTTATGTTATTTTTACACTGACTGTGACACAGTGGAGGACTAAATTCAGGAAGGCCATGAATAAAGCTGATAATGATGCGAGTACCAGGGCTGTCGATTCACTCATTAATTATGAGACTGTCAAATATTTCAATAATGAAGATTATGAAGGTGAAAAATATGATGAGTACCTAAAGAGGTATGAGGATGCTGCTCTGAAAACACAACGCAGTCTTGCTTCTCTGAACTTTGGTCAAAATGTGATATTTAGTACTGCACTTTCTACGGCAATGGTGTTGTCTTCTCATGGGATTATGAGCGGCCAGATGACTGTTGGTGATTTGGTGATGGTGAACGGGCTCCTCTTCCAACTTTCTCTTCCGCTCAATTTCCTTGGCAGTGTTTATCGTGAGACTATACAGAGTTTAGTTGACATGAAGGCAATGTTTCAGTTACTCGAGGAAAGAGCTGATGTTAGGGATAAAGACAATGCAAAGCCGCTGGAATTAAATGAAGGGAGCATAGAGTTTGAAAATGTACACTTCAGTTACCTTGCAGAGAGAAAAATACTTGATGGAATATCTCTGGTTGTGCCAGCTGGAAAAAGTGTGGCAATTGTTGGAACTAGTGGAAGTGGTAAGGTAAATCAACCATTCTTAGATTGCTCTTCAGGTTTTTTGACCCTCATTCCGGAAGTGTAA 750 0.4027 MVSGILAYKFGAPFALITSLSVAAYVIFTLTVTQWRTKFRKAMNKADNDASTRAVDSLINYETVKYFNNEDYEGEKYDEYLKRYEDAALKTQRSLASLNFGQNVIFSTALSTAMVLSSHGIMSGQMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKAMFQLLEERADVRDKDNAKPLELNEGSIEFENVHFSYLAERKILDGISLVVPAGKSVAIVGTSGSGKVNQPFLDCSSGFLTLIPEV 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1409 249 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 5 230 IPR039421 -
Lele28g1409 249 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 230 IPR027417 -
Lele28g1409 249 Gene3D - 182 243 IPR027417 -
Lele28g1409 249 Gene3D ABC transporter type 1, transmembrane domain 1 181 IPR036640 GO:0005524|GO:0016020
Lele28g1409 249 SUPERFAMILY ABC transporter transmembrane region 4 171 IPR036640 GO:0005524|GO:0016020
Lele28g1409 249 Pfam ABC transporter transmembrane region 5 144 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele28g1409 249 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 157 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele28g1409 249 CDD ABC_6TM_ATM1_ABCB7 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1409 Lele-ChrLele28 10165790 10169080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1409 27 245 Calmodulin-binding Proteins AT2G36910 25.322 2.55e-10 58.5