Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1397 ATGGGTATGTGTTTGAGTAAGAAGAAAGGGTCCTCTTCCTCCTTTTCCCCTGTCGTTGAAACCAAGTCTCTTTCTTCTTCAGCGCCTCCTGAGCTGAAGAAGAATAATTCTGCCAATGTCATTTCTGTTTCCAAACCCAAAGTCGAAACTAAGCCACAACTGATTCTGGAGAAAGATAAGAAGACGGTGCTTCCAGAGAAGCAAGTGCGTGAAGATGAAGGAGGCCCAGTGAAAAAAGAGATTTTCATTATCAAGCACAGGAAAAGCCATGATGACAGAGAGAGAAATTCCAAATGCCCACCAACTGTTCACCAAAATGCCTCAGTTGATGGGGTTGCTGAAAATGAAGCTTCTAATAATGAAGCAGCTGAGTTTATGGGTACTAACAATATTGTGCCACCAGCATCAACACCATCAGCAGCAGCAGCCATGGGAGTGGGTGTGGTGAGGACTTCAAGCTGCACCAAAGAAGAGGTGGATGCAATTCTCATTCAGTGTGGGAGACTCAACAGAAGCTCTTCTGGTAAAGCTTCTTCTTCTTCTGCCAGTGCTGGTGAACGTAGGAGAAGGTACTCTGGTTCAAAGAGAAGCTATGATTTTGATCACTGTGACAATGACACCATTTCTGCTGATGATGACCAAAGAAGAGCCAATGGCACTGACAATTGTGATCTGTGTGAAGATGATGGAGAGAAAAGCCGCCAACACCGCCCACGAGACCGCCAATCTCCAAGGAAGCCGTCTTCTTCTCATGGAAGGAGAAGGACCCCCAGCAGGGAAAGAGATCAGCAGCAGAACCAGCGATCCAGTAGCAGAGAGAGAAGGGTCAGCAGATCTCCTGGCAGAAGATCTTCAGAGACAAGCAACTCCACAAACACAAACCCAGCTTCTACCAATGCAGGCAACAATAACAGCAATACCACTTCTAGACCTGGAAAGATGGTCTCTGTTCCTCCAACTGTTTCATCCTTGGTTATGGACAAGAGTAACAATGGTGGTGGAGGAGAATCTGGAGTCAAGAGGATCTCAGTGAAGAGGAATGTTGATGGTGATAGTGGCATGGTGGGTTCAAGATCTGCAGCCTCCCCACGTTCTCAATCCCCTGCGAGAGCAAATGGAAATGGTACTGTTGCAAATTCTAAAGCACTGGGAGAGAATAATCCTCAGCAACAACCCTCACTTAGCCGTAACTCTTCAAGGAAAGCAGAACAATCGCCTTATAGAAGAAACCCATTGAGTGAAATTGATCCCAACTCATTTGCATATCCCCAATCTGCCAACAATAACAATAAGAAAATGAATGTTGATGTGAATGACAACACCAAAAGCAGAAGCAGGAGTGTGGGAAGAAATTGCAAGCCAAAGGATCAACACGAGGAAGAGATGATAGTGCATTGTCCAATGACTGAAAGTATTGTTGTGAAAACAGTTGTTCCTTCAGGAATTGAGAACCTTAAACAATCCCAGACATTAACAAGAAGTAGGTCCGCTAGGCGATCCCGGGACCTAGACATCAACCCCGAAGCAATGTTGAATCCTGAACAGTCATACACTTCACTACTACTTGAAGACATCCAGAACTTCCATCAAAAGAACACTGCTACACCACCTGTCTCTCTCCCTGCTTGTGTAACCAAAGCATGCTCTATACTTGAAGCTGTTGCTGATCTGAACTCCACTAACAGCTCAAATCTCCTCGGTGCCTTCTCCGATGACCGGAAAAGTCCACCCACGTGTCAATCAACTAAGAATGACTACAATGTCTCATTGTGCTCAAATCTTTATGGGAAAAAGAGGGTCACAGACACGAAAGATCCATTTGTAGAATCCGAGGTTGTTGTACATGATGATGTGATGGAGCCCAGCTTTCATAAGTATGTCACAGTGAAGAGGGGTGGTTCAGTTCGTGGTGGTGGCGTAAGTGGGGCAGACATGGAGGATCAAGAGTCTTCAGGAAGCAACAGTTTCACTGTGAGTGGTCAACAGAACTGGGGACTCTCATCTTCTTCATGGGAACCCAATTCTGGTGATTCTACAGATTGCTGGACTTCATTGAACTCCAGAGAGGAAGGAATCCAGAAAAGTTTTTCAGCCTGGGCATCTGAAGCAGGACCTGAAATGGAGGAAGCAAGGAGCAAGTCCAGTGGCAAGAGGAGAGAATGTGATCATCAGCACAGCAGTGGAATAGGGAGAGGCAGGCTTGCTGCAAGTAAGAGTCTGCATACCGTATCTGTTACTGCGGCTGCAACCACATAG 2256 0.4597 MGMCLSKKKGSSSSFSPVVETKSLSSSAPPELKKNNSANVISVSKPKVETKPQLILEKDKKTVLPEKQVREDEGGPVKKEIFIIKHRKSHDDRERNSKCPPTVHQNASVDGVAENEASNNEAAEFMGTNNIVPPASTPSAAAAMGVGVVRTSSCTKEEVDAILIQCGRLNRSSSGKASSSSASAGERRRRYSGSKRSYDFDHCDNDTISADDDQRRANGTDNCDLCEDDGEKSRQHRPRDRQSPRKPSSSHGRRRTPSRERDQQQNQRSSSRERRVSRSPGRRSSETSNSTNTNPASTNAGNNNSNTTSRPGKMVSVPPTVSSLVMDKSNNGGGGESGVKRISVKRNVDGDSGMVGSRSAASPRSQSPARANGNGTVANSKALGENNPQQQPSLSRNSSRKAEQSPYRRNPLSEIDPNSFAYPQSANNNNKKMNVDVNDNTKSRSRSVGRNCKPKDQHEEEMIVHCPMTESIVVKTVVPSGIENLKQSQTLTRSRSARRSRDLDINPEAMLNPEQSYTSLLLEDIQNFHQKNTATPPVSLPACVTKACSILEAVADLNSTNSSNLLGAFSDDRKSPPTCQSTKNDYNVSLCSNLYGKKRVTDTKDPFVESEVVVHDDVMEPSFHKYVTVKRGGSVRGGGVSGADMEDQESSGSNSFTVSGQQNWGLSSSSWEPNSGDSTDCWTSLNSREEGIQKSFSAWASEAGPEMEEARSKSSGKRRECDHQHSSGIGRGRLAASKSLHTVSVTAAATT 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1397 751 MobiDBLite consensus disorder prediction 170 187 - -
Lele28g1397 751 MobiDBLite consensus disorder prediction 170 458 - -
Lele28g1397 751 MobiDBLite consensus disorder prediction 634 736 - -
Lele28g1397 751 MobiDBLite consensus disorder prediction 282 330 - -
Lele28g1397 751 MobiDBLite consensus disorder prediction 358 406 - -
Lele28g1397 751 MobiDBLite consensus disorder prediction 417 447 - -
Lele28g1397 751 MobiDBLite consensus disorder prediction 86 113 - -
Lele28g1397 751 PANTHER OS02G0734667 PROTEIN 1 749 IPR040412 -
Lele28g1397 751 MobiDBLite consensus disorder prediction 188 281 - -
Lele28g1397 751 MobiDBLite consensus disorder prediction 706 727 - -
Lele28g1397 751 MobiDBLite consensus disorder prediction 646 694 - -
Lele28g1397 751 MobiDBLite consensus disorder prediction 7 38 - -
Lele28g1397 751 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1397 Lele-ChrLele28 10092933 10095297 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1070 01 6249734 6257645 Lele28g1397 28 10092933 10095297 CCT
Lele02g1096 02 6939113 6940632 Lele28g1397 28 10092933 10095297 CCT
Lele03g1075 03 6244859 6253576 Lele28g1397 28 10092933 10095297 CCT
Lele04g1084 04 6805296 6806591 Lele28g1397 28 10092933 10095297 CCT
Lele28g1397 28 10092933 10095297 Lele28g1397 28 10092933 10095297 ECH
Lele25g1388 25 9937440 9939835 Lele28g1397 28 10092933 10095297 hybridization
Lele26g1412 26 9907104 9909493 Lele28g1397 28 10092933 10095297 hybridization