Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1376 ATGTATGAAATGCCGGTGTTAGTAAGAGAGCACATTGGAGGAAGTTCAACCAAAAAGAAGGCTATTATTGGTGGGGTCGTCGGAGGGGCATCTGTTATTTTGATCCTTCTTGCATTATTTGCTTTGCATAGACGTTCACGGTTATCCAAGAGGAATCCAAGAGGTGACATTTTGGGAGCAACTGAGTTGAAAGGCCCTGTTAACTATAGGTATAAAGATCTAAAGGCTGCAACAAAAAATTTCAGTAAAGAAAATAAACTAGGAGAAGGAGGTTTTGGTGATGTGTACAAGGGCACTCTAAAAAATGGAAAAGTAGTTGCTGTCAAGAAATTAGCGTTAGGCCAATCCAAACAGATGGAGAAAGATTTTGAGAGTGAAGTGAAGTTGATAAGTAATGTCCATCATCGGAATCTTGTTCGACTTCTAGGATGTTGCACAAAGGGTCAAGAGAGATTCCTTGTTTATGAGTACATGAAAAACAACAATCTTGGCCAATTCTTATTTGGAACAATGGGATACACTGCACCTGAATATGCAATGCATGGGCAATTATCAGAGAAAGTTGATACTTACAGCTATGGTGTTGTACTTCTAGAAATCATAAGTGGACAAAAGAGTGGTGAATTGAAGAATGGTGATTCAAGCGAACTCCTCCTTCAAAGAGCTTGGAAACTGTACGATAAAGGAATGCACATAGAGTTTGTTGACAATACCTTAGATCCAAATGAGTATGATGCAGAAGAAGTAAAGAAAATCATAGAGATTGGATTGCTTTGCACCCAGGCATCTCCTGCAGCTAGGCCAACAATGTCTGAAATTGTTGTTATGCTCAAAACCAAGGGCTTAATGGAGCACAAGAAACCCACCATGCCTGTCTATGTTGATGCAAATTTGAGGCCTAGAACAAACAATTCTATGTCTAATGGTACATCTTCTTCAAATGCTACTGTTTCCATTTCGAGTATATCAGGAAGATGA 978 0.3916 MYEMPVLVREHIGGSSTKKKAIIGGVVGGASVILILLALFALHRRSRLSKRNPRGDILGATELKGPVNYRYKDLKAATKNFSKENKLGEGGFGDVYKGTLKNGKVVAVKKLALGQSKQMEKDFESEVKLISNVHHRNLVRLLGCCTKGQERFLVYEYMKNNNLGQFLFGTMGYTAPEYAMHGQLSEKVDTYSYGVVLLEIISGQKSGELKNGDSSELLLQRAWKLYDKGMHIEFVDNTLDPNEYDAEEVKKIIEIGLLCTQASPAARPTMSEIVVMLKTKGLMEHKKPTMPVYVDANLRPRTNNSMSNGTSSSNATVSISSISGR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1376 325 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 168 - -
Lele28g1376 325 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Lele28g1376 325 Gene3D Phosphorylase Kinase; domain 1 47 157 - -
Lele28g1376 325 MobiDBLite consensus disorder prediction 300 325 - -
Lele28g1376 325 ProSiteProfiles Protein kinase domain profile. 81 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1376 325 SUPERFAMILY Protein kinase-like (PK-like) 69 308 IPR011009 -
Lele28g1376 325 Gene3D Transferase(Phosphotransferase) domain 1 165 304 - -
Lele28g1376 325 FunFam Cysteine-rich receptor-like protein kinase 2 46 157 - -
Lele28g1376 325 Pfam Protein tyrosine and serine/threonine kinase 83 167 IPR001245 GO:0004672|GO:0006468
Lele28g1376 325 Pfam Protein tyrosine and serine/threonine kinase 172 276 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1376 Lele-ChrLele28 9920362 9924061 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1376 65 282 Receptor kinase-like Gene Family AT4G23280 37.247 8.42e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele28g1376 PK_Tyr_Ser-Thr 1.4e-08 CL0016