Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1370 ATGATGCTGCGAAACACGCAACAAAAGCCTTTCTTCTTCTTCTACTTGGTGAGCTTCACAATCTGGTCATTGTGGACTCTGAACGTCGTGGTTTCAGACCCACAGACGAATTTCGTGAAAATAGGGTGCAGCCAATACAACGTAACAGACACAGGAATCTTCCATGAGAACCTGAAGACAACATTCAGAGAGTTGAAAGCTCAGATCAAGAACCAAAGCAAACACTTCGCTACGTCGCAGGCAGTGAAGGGTAACAACCCAGCTTATAGTCTTTTTCAGTGCAGAAACTACCTCTCCATCTCCGACTGCCTCTCTTGCTTCCGATTCGCCTCCCGGAATATTCGCAACTGCTCCTACAGCGCCACCGGTGCCCGGATCATCTATGAAGGATGCTTCCTTAGGTACGAGAGCAGTGGATTCTTTGCCCAGAACACAGATGCTGGCAACAACATTATGTGTGGGAATAAAACCAGAAACTCAACTGAACTTGCTTCAACTGTGCAACAAGTTCTCACAAATCTGGAAATAGCGACACCAAGAATACCTAATTTCTATGCTGCCACTAAAGCACAAGTGCCTAATACTAACACTTCAATTTATGCCTTCGCTCAATGTCTTGAGACTCTTACTCAAAGTGGCTGCCAAGATTGCTTGAAGATTGGCTTAAAAAATTTCCAGATATGTCTTCCCAGTTCAAATGCTACGACTTATGATGCCGGTTGTTTCATGAGATACTCCACCTCTGCTTTCTTTGCTGATAATCAAACCACTAATATCAAGCATTTCTTGAAACAAGGAGGAGGTTCAACCAAGAAGAAGGCTATTATTGGTGGGGTTGTTGGAGGTGCATCTGTTATTTTGATTCTTCTTGTATTATTTGCTTTGCATAGACGATCCCAGTTATCCAAGAGGAATTTTAGAGGTGACATTTTGGGAGCAACTGAGTTGCAAGGCCCTGTTAACTATAGCTATAAAGATCTGAAATCTGCAACAAAAAATTTCAGCAAAGAGAATAAACTTGGAGAAGGAGGTTTTGGTGATGTATACAAGGGCACTCTGAAAAATGGAAAAGTTGTTGCTGTCAAGAAATTGGCTTTAGGCCAATCCAAAGAGATGGAGAAAAACTTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTTGTTCGACTTCTGGGATGTTGTAGCAAAGGACAAGAAAGAATCCTTGTTTATGAGTACATGAAAAACAACAATGTTGGCCAATACTTATTCGGTAAAAATAAAGGTTCTCTCAGTTGGAAGCTACGTCACGGTATAATTTTGGGCATTGCAAGAGGTTTAGCCTATCTGCACGAGGAGTTTCATGTTTGTATTATACACAGAGATATAAAACCTAGCAACATCCTCTTAGACGATGATTTTCAACCTAAAATTGCCGATTTTGGACTAGCAAGGCTTTTGCCAAGAGACCAATCTCATCTTAATACAAGATTTGCTGGAACAATGGGATATACAGCACCTGAATATGCAATGCATGGAACACTATCAGAGAAGGTTGATACTTACAGCTATGGAGTTGTAGTCCTAGAAATTATAAGCGGACAAAAGAGTGGTGAAGTGAAAGTTGATAATGAAAGCGAATTACTCCTTCAAAAGGCTTGGAAGCTATACGAGAGAGGGATGCACTTAGAGTTTGTGGACAAAACCTTAGACACGAGTGAGTATGATGCAGAAGAAGTAAAGAAAATCATAGAGATTGGATTACTTTGCACGCAAGCATCTCCTGCGGCGAGGCCAACGATGTCTGAAATTGTTGTTATGCTCAAAAGCAAAGGATTAATGGAGAACAAGAAACCCACTATGCCTGTCTACGTTGATCCTAATTGGAGGCCCAAAAGAGACACTTCTACGTCTAATAGTTCATCTTCATCAAATGCAACTGTCTCTCGGTCCATTCTATCAGGAAGGTGA 1962 0.4118 MMLRNTQQKPFFFFYLVSFTIWSLWTLNVVVSDPQTNFVKIGCSQYNVTDTGIFHENLKTTFRELKAQIKNQSKHFATSQAVKGNNPAYSLFQCRNYLSISDCLSCFRFASRNIRNCSYSATGARIIYEGCFLRYESSGFFAQNTDAGNNIMCGNKTRNSTELASTVQQVLTNLEIATPRIPNFYAATKAQVPNTNTSIYAFAQCLETLTQSGCQDCLKIGLKNFQICLPSSNATTYDAGCFMRYSTSAFFADNQTTNIKHFLKQGGGSTKKKAIIGGVVGGASVILILLVLFALHRRSQLSKRNFRGDILGATELQGPVNYSYKDLKSATKNFSKENKLGEGGFGDVYKGTLKNGKVVAVKKLALGQSKEMEKNFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMKNNNVGQYLFGKNKGSLSWKLRHGIILGIARGLAYLHEEFHVCIIHRDIKPSNILLDDDFQPKIADFGLARLLPRDQSHLNTRFAGTMGYTAPEYAMHGTLSEKVDTYSYGVVVLEIISGQKSGEVKVDNESELLLQKAWKLYERGMHLEFVDKTLDTSEYDAEEVKKIIEIGLLCTQASPAARPTMSEIVVMLKSKGLMENKKPTMPVYVDPNWRPKRDTSTSNSSSSSNATVSRSILSGR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1370 653 Pfam Protein kinase domain 334 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1370 653 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Lele28g1370 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Lele28g1370 653 FunFam Cysteine-rich receptor-like protein kinase 2 148 250 - -
Lele28g1370 653 SMART serkin_6 334 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1370 653 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 639 - -
Lele28g1370 653 SUPERFAMILY Protein kinase-like (PK-like) 318 640 IPR011009 -
Lele28g1370 653 MobiDBLite consensus disorder prediction 616 653 - -
Lele28g1370 653 CDD STKc_IRAK 340 606 - -
Lele28g1370 653 MobiDBLite consensus disorder prediction 628 653 - -
Lele28g1370 653 FunFam Cysteine-rich receptor-like protein kinase 2 299 410 - -
Lele28g1370 653 Gene3D Transferase(Phosphotransferase) domain 1 411 619 - -
Lele28g1370 653 FunFam Cysteine-rich receptor-like protein kinase 2 411 613 - -
Lele28g1370 653 Coils Coil 55 75 - -
Lele28g1370 653 ProSiteProfiles Gnk2-homologous domain profile. 145 250 IPR002902 -
Lele28g1370 653 ProSitePatterns Protein kinases ATP-binding region signature. 340 363 IPR017441 GO:0005524
Lele28g1370 653 Pfam Salt stress response/antifungal 43 137 IPR002902 -
Lele28g1370 653 Pfam Salt stress response/antifungal 157 247 IPR002902 -
Lele28g1370 653 Gene3D Phosphorylase Kinase; domain 1 311 410 - -
Lele28g1370 653 ProSiteProfiles Protein kinase domain profile. 334 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1370 653 Gene3D - 35 140 IPR038408 -
Lele28g1370 653 Gene3D - 147 250 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1370 Lele-ChrLele28 9832582 9837433 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1370 14 653 Receptor kinase-like Gene Family AT1G70520 36.000 6.68e-127 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele28g1370 Pkinase 6.1e-52 CL0016