Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1369 ATGGCTGCTTCCTCAGGTACGAGATCACTGCTTTCTTTGAGCAGACAACGGAGTATTTCAATGCCGTTTCATATAATTGATATCACCTCCCTGGGCAAGCAAGGTTCAAGCAAGAAAGGGTACATTAATGTTATTATTGGTGGAATTGTTGGAGGTGTAGCTTTTCTTTTGATCCTCTTTGCATTATTTGCCTGGATCATCAGACGACCAAAAGCCCCTAAGAAAGTTCCCAGAGGAGAGATAACTGGAGAAAGCAAGTTAGCCGGCCCAGTTACTTACAGTTACAAGGAATTGAAGTTTGCAACCAAGAATTTTAGTAAGGAAAATAAACTAGGAGAAGGAGGGTTTGGCGTTGTATATAAGGGTACTCTAAAAAATGGTAAAGTAGTTGCTATCAAGAAATTAAATGCTCGCCAATTCACAAAGGTGGAGGAAGAATTTGAAAGTGAAGTGAAGCTGATAAGTAATGTTCATCATCTGAATCTTGTTCGACTTCTAGGATGTTGCAGTAAAGGGCGCAACAGAATTCTTGTTTATGAATATATGAAAAACAATAGTCTTGACAAGTTCTTATTTGGTAAAAAGAAGGGTTCTCTCAACTGGAAGCAAAGATGTGACATTATTTTAGGAACAGCGAATGGGTTGGCTTATCTGCATGAAGAATTTCCTGTTTGTATCATACATAGAGATATAAAGACTAACAACATCCTCTTAGATGATAATCTACAGCCTAAAATTGCTGATTTTGGGTTGGCAAGGCTTTTGCCCGATGACAAATCTCATCTGAGCACAAAATTTGCAGGAACAATAGGATATACGGCACCTGAGTATATTCTTCATGGCCAATTATCAGAGAAGGCTGATATCTATAGTTATGGTGTTGTGGTCTTGGAAATCATTAGCGGTCGACACAGTAAGGAATTAACCATTGATGGAGATGCTGATGGTGAATTCCTCCTTCAAGAGGCTTGGAAATTATATGACAAAGGCATGCACCTAGAGTTGGTGGACAAGACCTTAGACCCTACGGAGTATGATAAAGAAGAAGTGAAGAAAATCATAGAGATCGGTTTGCTTTGCACTCAAGCATCTGCTGATACAAGGCCAATGATGTCTGAAGTGGTATTTTTGCTCCAAAACAAGGATTTGTTAGAGAATATGAAACCCACTATGCCTATCTTGATTGAAACTAATTAA 1197 0.3876 MAASSGTRSLLSLSRQRSISMPFHIIDITSLGKQGSSKKGYINVIIGGIVGGVAFLLILFALFAWIIRRPKAPKKVPRGEITGESKLAGPVTYSYKELKFATKNFSKENKLGEGGFGVVYKGTLKNGKVVAIKKLNARQFTKVEEEFESEVKLISNVHHLNLVRLLGCCSKGRNRILVYEYMKNNSLDKFLFGKKKGSLNWKQRCDIILGTANGLAYLHEEFPVCIIHRDIKTNNILLDDNLQPKIADFGLARLLPDDKSHLSTKFAGTIGYTAPEYILHGQLSEKADIYSYGVVVLEIISGRHSKELTIDGDADGEFLLQEAWKLYDKGMHLELVDKTLDPTEYDKEEVKKIIEIGLLCTQASADTRPMMSEVVFLLQNKDLLENMKPTMPILIETN 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1369 398 SMART serkin_6 105 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1369 398 CDD STKc_IRAK 111 375 - -
Lele28g1369 398 FunFam Cysteine-rich receptor-like protein kinase 2 72 181 - -
Lele28g1369 398 Gene3D Transferase(Phosphotransferase) domain 1 182 390 - -
Lele28g1369 398 Pfam Protein tyrosine and serine/threonine kinase 107 375 IPR001245 GO:0004672|GO:0006468
Lele28g1369 398 FunFam Cysteine-rich receptor-like protein kinase 2 182 386 - -
Lele28g1369 398 ProSiteProfiles Protein kinase domain profile. 105 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1369 398 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 52 396 - -
Lele28g1369 398 SUPERFAMILY Protein kinase-like (PK-like) 88 378 IPR011009 -
Lele28g1369 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Lele28g1369 398 Gene3D Phosphorylase Kinase; domain 1 79 181 - -
Lele28g1369 398 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1369 Lele-ChrLele28 9738474 9742724 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1369 33 379 Receptor kinase-like Gene Family AT1G56120 47.564 2.16e-98 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele28g1369 PK_Tyr_Ser-Thr 1.7e-52 CL0016