Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1368 ATGCTTCAACCAAATTATTTCCTTCTTTTGATCACCTTCATCTTCTGTTCATGGTGGTTGATGCTTAACGGTGTCGTTTCAGACCCGCAGACCAATCTTCTGGCCAAAGGGTGTTCCCCATCTAACTCATTCATCTTGTCCAACTTCTCCATCTTCAGTGACAATGTCAACAAAACGTTTCAAGATATCAGAGAGCAGCTTGTCAACAAAAACACGTACTTTGCCACGGCGCAGCAAGCCAACGCAGAAAACCCAGTGTTCACTCTTTTTCAGTGCAGAAACTACCTCTCCATTCATGACTGTGTTGCCTGCTTTGACGAGGCCGCCGCCAAAGAAGTCCGGGACTGCCGTGCCGGAGCCACAGGTGGTCGTGCCGTCTTCGACGGCTGCTTCCTCAGGTACGAGACCAGCAGCGCTTTCTTTCAGGAGACAACGGAGAATTTCAACACCGTAGCATGTGGAAATGAAACTGTAAGAGAATACACTACAGAATATACCTCAGTCGCGCAACAAGTGCTGATGAATCTGCAAACTACAACACCCAAAACACAAGGGCTTTTCATGGCGACGAAAGCGCATTTGCCTGATAATGTTGGTGCAACTATTTATGCCTTTGCTCAATGTGTTCAAACAATCTCACGGAGTGGGTGCCAGGATTGCTTGAAGTCTGGTTATAGTAATATGCAGATTTGTCTTCCCAATTCGGATGCTAGGGCTTTGGCTGCTGGTTGCTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATGATTACCAGACCATTGATATCACTCCCTTGGGCAAACAAGGTTCAAGCAATAAGGGAGCTATTATCGGTGGAGTTGTTGGAGGTGTAATTCTTGTTTCGATCCTCCTTATATTATTTGTCTGTATTATTAGACGGGCAAAATGCACTAAGAGGAGGGTTCATAGAGGAGACTTCATTAGAGCAACTAAGTTGAACGGCCTTATTACATATACTTATAAGGATTTGAAGTTTGCAACTGAGAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGATTTGGTGCGGTATATAAGGGCTCTACGAGGGATGGTAAAGAAGTTGCAGTCAAGAAGTTAACTTTACAAAACTCCAGGAGATTGGATGAATATTTTGTGAGTGAACTGATGCTCATAAGTGACACTCATCATCCGAATCTTGTTCAACTTTTGGGATGGTGTAGCAACGGTCGTGACAGAATCCTCGTTTATGAGTACATGAAAAACAACAGTCTCGACAAATTCTTATACGGTGGAAAGAAAGGTTTTCTCAACTGGAAGCAACGATATGACATAATTTTAGGAATAGCAAGAGGTTTGAATTATCTGCATGAAGAATTTCGTGTTCGTATTATTCATAGAGATATAAAGACAAACAACATTCTCTTGGACAATGATCTACAGCCTAGAATTGCTGATTTTGGATTGGCAAGACTTTTACCTGAGGATAAATCTCATGTTAGCACAAAATTTGCAGGAACATTAGGATACACAGCACCAGAGTATGCAATCCATGGGCAATTATCAGAGAAGGCTGATATCTATAGTTATGGTGTTGTGATCCTTGAAATCATCAGCGGTCAAAGAAGCAAAGCATTAAAGGAAGATGGTGATACTGAAGATGATTTCCTCCTTCCAAAAGCTTGGAAACTATATGAGAAAGGCATGCACTTAGAGTTGGTGGACAAAGCCTTAGACCCTAATGACTACGACGCAGAAGAAGTGAAGAAAGTCATAGAGATTGGTTTGCTTTGCACTCAAGCATTTGCAGACTTAAGGCCAACGATGTCTGAAGTAATTGGTTTGCTCCAAAACAGCGCCTTATTAGAGAATTATAATATAAGACCCTCTATGCCTCTCTTGATTGTAACTGAATAG 1902 0.4196 MLQPNYFLLLITFIFCSWWLMLNGVVSDPQTNLLAKGCSPSNSFILSNFSIFSDNVNKTFQDIREQLVNKNTYFATAQQANAENPVFTLFQCRNYLSIHDCVACFDEAAAKEVRDCRAGATGGRAVFDGCFLRYETSSAFFQETTENFNTVACGNETVREYTTEYTSVAQQVLMNLQTTTPKTQGLFMATKAHLPDNVGATIYAFAQCVQTISRSGCQDCLKSGYSNMQICLPNSDARALAAGCFMRYSTTSFFPDDYQTIDITPLGKQGSSNKGAIIGGVVGGVILVSILLILFVCIIRRAKCTKRRVHRGDFIRATKLNGLITYTYKDLKFATENFSEENKLGEGGFGAVYKGSTRDGKEVAVKKLTLQNSRRLDEYFVSELMLISDTHHPNLVQLLGWCSNGRDRILVYEYMKNNSLDKFLYGGKKGFLNWKQRYDIILGIARGLNYLHEEFRVRIIHRDIKTNNILLDNDLQPRIADFGLARLLPEDKSHVSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGVVILEIISGQRSKALKEDGDTEDDFLLPKAWKLYEKGMHLELVDKALDPNDYDAEEVKKVIEIGLLCTQAFADLRPTMSEVIGLLQNSALLENYNIRPSMPLLIVTE 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1368 633 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Lele28g1368 633 FunFam Cysteine-rich receptor-like protein kinase 2 148 253 - -
Lele28g1368 633 ProSiteProfiles Gnk2-homologous domain profile. 146 253 IPR002902 -
Lele28g1368 633 Gene3D - 30 138 IPR038408 -
Lele28g1368 633 Gene3D - 145 253 IPR038408 -
Lele28g1368 633 FunFam serine/threonine-protein kinase PBS1-like 306 414 - -
Lele28g1368 633 Gene3D Phosphorylase Kinase; domain 1 312 414 - -
Lele28g1368 633 ProSiteProfiles Protein kinase domain profile. 338 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1368 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Lele28g1368 633 Pfam Salt stress response/antifungal 47 136 IPR002902 -
Lele28g1368 633 Pfam Salt stress response/antifungal 153 250 IPR002902 -
Lele28g1368 633 SUPERFAMILY Protein kinase-like (PK-like) 320 611 IPR011009 -
Lele28g1368 633 Gene3D Transferase(Phosphotransferase) domain 1 415 622 - -
Lele28g1368 633 ProSiteProfiles Gnk2-homologous domain profile. 31 139 IPR002902 -
Lele28g1368 633 Pfam Protein kinase domain 339 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1368 633 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 618 - -
Lele28g1368 633 FunFam Cysteine-rich receptor-like protein kinase 2 415 619 - -
Lele28g1368 633 CDD STKc_IRAK 344 613 - -
Lele28g1368 633 SMART serkin_6 338 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1368 Lele-ChrLele28 9716590 9721267 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1368 4 613 Receptor kinase-like Gene Family AT1G70520 36.290 5.41e-119 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele28g1368 Pkinase 2.8e-49 CL0016