Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1367 ATGAAGCGGGGTGTTTATGCCCTAACGACAGCCAAGAGCTCGGCTTCAACATCGGTCACATTGTCCCAGCCGGTCGGTTCAAGCAATAAGGGAGCCATTATAGGTGGAATTGTTGGAAGCTTAGTAGCTGTTGCTTTGATCTTTCTTGTATCATTTATCTGGATTAGACGACGACTAAAAAGGCCTAGGAGGGTTCCTAGAGGGGACATAACTGGAGCAAGCAAGTTGAAAGGCCCAGCCATTTATGAATATAAGGACTTGAAGACTGCAACCAAGAATTTCAGTGAAGAAAATAAACTCGGAGAAGGAGGATTTGGTGTTGTATATAGGGGCACTTTGAGGGATGGAAAAGATATTGCAGTCAAGAAATTAACATTTCATCACTTCACGAAGATGGAGGAGGATTTTGAAAATGAAGTGAAACTTATAAGTAACGTTCACCATCGAAATCTTGTCCGGCTCCTGGGATATTGTATTCATGACAAGAACAGAATCCTTGTTTATGAATACATGAAAAATAGCAGTCTTGACGTATTCTTATTCGGAACATTAGGATACATAGCACCAGAGTATTTAATTCATGGGCAATTATCTGAAAAGGCTGATGTCTATAGTTATGGTGTTGTAATCTTGGAGATTATCAGTGGCCAAAAGAGTAAGGAGCTAAGGTTCTATGGTGATGGCGATGGCGAATTCCTCCTTCAAAAGGGTCCTCTTGTAAATGCTAGATCAAGCAAACTGACCAAATTTTGTGCAAGAGACGCGGCAATGCAACATGGGTAA 783 0.4125 MKRGVYALTTAKSSASTSVTLSQPVGSSNKGAIIGGIVGSLVAVALIFLVSFIWIRRRLKRPRRVPRGDITGASKLKGPAIYEYKDLKTATKNFSEENKLGEGGFGVVYRGTLRDGKDIAVKKLTFHHFTKMEEDFENEVKLISNVHHRNLVRLLGYCIHDKNRILVYEYMKNSSLDVFLFGTLGYIAPEYLIHGQLSEKADVYSYGVVILEIISGQKSKELRFYGDGDGEFLLQKGPLVNARSSKLTKFCARDAAMQHG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1367 260 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Lele28g1367 260 Pfam Protein tyrosine and serine/threonine kinase 97 180 IPR001245 GO:0004672|GO:0006468
Lele28g1367 260 Pfam Protein tyrosine and serine/threonine kinase 185 218 IPR001245 GO:0004672|GO:0006468
Lele28g1367 260 Gene3D Transferase(Phosphotransferase) domain 1 179 252 - -
Lele28g1367 260 FunFam Cysteine-rich receptor-like protein kinase 2 59 170 - -
Lele28g1367 260 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 182 224 - -
Lele28g1367 260 Gene3D Phosphorylase Kinase; domain 1 69 170 - -
Lele28g1367 260 ProSiteProfiles Protein kinase domain profile. 94 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1367 260 SUPERFAMILY Protein kinase-like (PK-like) 74 218 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1367 Lele-ChrLele28 9679440 9684246 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1367 182 219 Receptor kinase-like Gene Family AT4G23190 60.526 5.72e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele28g1367 PK_Tyr_Ser-Thr 1e-17 CL0016