Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1366 ATGGTACCCTTGATCAAACAAGGTTCAAATAATAAGAAGGGGGCCATTATAGGTGTAGTTGTTGGAGGTGTAGCTTTTGTTTTGATCCTTCTTACAGTAGTATTAGCTTGGATTAAACGACCAAAAAGGCCTCAGAGATCAGTTCCTAGAGGTGACATATCTGGAGTAAGTAAGTTGAGAGGCCCAATTACTTATAGTTATAGGGAGTTGAAGTTTGCTACTAAAAGTTTCAGTGCAGAAAATAAACTTGGAGAAGGAGGATTTGGTGCTGTATATAAGGGTACTTTGAAGAATGGAAAAGTAGTTGCTGTAAAGAAATTAACATTACGTAGTGAGTCTAAAAAGGTGGAAGAAGAATTTGAAAGTGAAGTGAAGCTCATAAGCAATGTTCATCATCGAAATCTTATTCGGCTTCTTGGATATTGCAGTAAAGGCGATGAGAGAATTCTTATTTATGAATATATGAAAAACACCAGTCTTGACAAATTCTTATTTGGATACACAGCACCAGAATATGCAATTCATGGTCAATTATCAGAAAAAGCTGATATTTATAGCTACGGGGTTGTGGTCTTAGAAATTATCAGTGGTGAACAAAGCAATAAATTGAAGATGCATGGTGATTCTGAAGGCGCATTCCTCCTTCAAACAGCTTGGAAACTATATGAGAGAGGCTTACACGTAGAATTGGTGGATGATACCTTGGATCCTAATGATTATGATGTAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACCCAAGCATCTGCTGAATTAAGGCCAACAATGTCTGAAGTAATTGTTTTGCTCCAAGGCGAGAGCTTATTAGAGAATATGAGACCCACCATGCCTATCTTGATTGAAACTTAA 879 0.3709 MVPLIKQGSNNKKGAIIGVVVGGVAFVLILLTVVLAWIKRPKRPQRSVPRGDISGVSKLRGPITYSYRELKFATKSFSAENKLGEGGFGAVYKGTLKNGKVVAVKKLTLRSESKKVEEEFESEVKLISNVHHRNLIRLLGYCSKGDERILIYEYMKNTSLDKFLFGYTAPEYAIHGQLSEKADIYSYGVVVLEIISGEQSNKLKMHGDSEGAFLLQTAWKLYERGLHVELVDDTLDPNDYDVEEVKKIIEIGLLCTQASAELRPTMSEVIVLLQGESLLENMRPTMPILIET 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1366 292 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Lele28g1366 292 ProSiteProfiles Protein kinase domain profile. 77 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1366 292 Gene3D Transferase(Phosphotransferase) domain 1 152 286 - -
Lele28g1366 292 Pfam Protein tyrosine and serine/threonine kinase 79 164 IPR001245 GO:0004672|GO:0006468
Lele28g1366 292 Pfam Protein tyrosine and serine/threonine kinase 167 271 IPR001245 GO:0004672|GO:0006468
Lele28g1366 292 SUPERFAMILY Protein kinase-like (PK-like) 60 278 IPR011009 -
Lele28g1366 292 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 165 - -
Lele28g1366 292 Gene3D Phosphorylase Kinase; domain 1 47 151 - -
Lele28g1366 292 FunFam Cysteine-rich receptor-like protein kinase 2 44 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1366 Lele-ChrLele28 9665541 9668042 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1366 145 288 Receptor kinase-like Gene Family AT5G10530 29.167 2.96e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele28g1366 PK_Tyr_Ser-Thr 1.2e-06 CL0016