Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1363 ATGATTCTTCGTCAATCGCTTAAGCATGTCGTTGCTGAACGTGGGCCGAGCCAGGGTTCCGTTTTGCATCATCTTCTTCTCTTTTTCCTCGTGGCCTCGGTCGGGGTCGCTAATCTGAAAACTTTTTATTCCCTTGTGCTACACCTATTATGTGTGGCACGATTGAAGCTCTTTTCTTTCTCCTCCCTTCGTTTGTGTGGTTTGATGTTACTAGCTCTAAAACTGACGTTGTTAGTTTCAACAATAAATATTGCAAACAAGGTCGACTCAATAAAAGTCAACGGAGTTGGATATTGTTATGACATTGAAAGTCAAGAAGAAAATCTGTCGACCATAAGGTACCTTTCCATTGCTGACTGTGTCGCCTGCTTCGACGTCGCCACCATAGAGCTCCGCAAATGCGCTGCCACCTCGTCCCCCTCCGCGGGCGCCTTTGTTGTCTACGATGGCTGCGTCATCAGGTACAACTACAACACTTTCTTTAACGAGGCAACAAATACTTTTAATGGTGTAACATGTGGGAATGAGACTTCAGGAGGGGGCTCAGCATTTACCGGAGCAACCCAAGAAGTACTAAAGAATCTCCAAATATCAACGCCAACAATACCCAGTTTCTTTGCGGCCACGAAGATGCCAGTTCCACATGATAGTTCAACTATTTATGCCTTTGCTCAATGTGTTGATACTATCACAACGAGTGGGTGCCAAGATTGCTTGAAGACTGGGTACAATAATTTGCAGATTTGTCTTCCTTTTTCAGATGGTAGAGCTTTCGATGCAGGCTGTTTCATGAGATATTCCACTACTTCCATTTTTCCTGATAACCAAACAACGATTGATATTACCAACTTCGTCAAACAAGGTTCTTCAAGAAACAAAGGTGAAACTATTGGAGGAGTTGTTGGAGGTGTAGCTCTTGCTTTGATCCTCCTTGCATTATTTGCCTGGATTAAACGACGAACAAGCGATAAGACGATGCCAGGAGGAAACCAGTTGAGAAGCGACTTAACTGGAGTAAGCAAGTTGAAAGGCCCACTTACTTACAGTTATAACGAATTGATGATTGCAACAAAAAGTTTTAGTGAGGAAAATAAACTAGGAGAAGGGGGATTTGGAGCTGTATACAAGGGCACTTTGAAGAATGGGAAAGTTGTTGCAGTCAAGAAATTGACTACATTCCGCTCCAAAAGGGTGGAGGAAGATTTTGAAAGTGAAGTGATGCTTATAAGTAATGTTCATCATCGGAATCTTGTTCGACTCCTGGGATGTTGTAGTAAAGGCTATGATAGAATCCTTGTCTATGAATATATGAAAAACAGCAGTCTTGATAGATTCTTATTTGGTAAGAAGAAAGGTTCTCTCAATTGGAAGCAGCGACATGACATAATTTTAGGAATAGCAAGAGGTTTGACTTATCTACATGAAGAATTTCCTGTTCGTATTATACACAGAGATATCAAGACAAATAATGTCCTCTTAGATGATGATCTACAAGCTAAAATTGCTGATTTTGGGCTAGTAAGACTTTTACCTGAAAACAAATCCCATGTAAGCACAAGACTTGCAGGCACATTAGGATACACAGCACCGGAGTATGCAATTCATGGACAATTATCAGAGAAAGCTGATATTTATAGTTATGGTGTTGTAGTTCTTGAAATTATCAGTGGTAAAAAATGCAGAGAATTTAATCTTGATCTTTTTGATGAAGGGGCATTCCTTCTTCAAAAAGCTTGGAACCTATATGAGAAAGGAAAGCATATAGAGTTGGTGGACAAAACCGTTGACCCGAAAGGTTATGATGCAGAAGAAGTGAAGAAAACTATAGAGATTGGTTTGCTTTGCACGCAGGCATCTGCAGATACAAGGCCACTGATGTCTGAAGTAGTTGCTATGCTTCAAAACAAGGATCTATTAGAGAACATAAAGCCCACTATGCCTATCTTGATAGGAACTGATGATTAG 1965 0.4071 MILRQSLKHVVAERGPSQGSVLHHLLLFFLVASVGVANLKTFYSLVLHLLCVARLKLFSFSSLRLCGLMLLALKLTLLVSTINIANKVDSIKVNGVGYCYDIESQEENLSTIRYLSIADCVACFDVATIELRKCAATSSPSAGAFVVYDGCVIRYNYNTFFNEATNTFNGVTCGNETSGGGSAFTGATQEVLKNLQISTPTIPSFFAATKMPVPHDSSTIYAFAQCVDTITTSGCQDCLKTGYNNLQICLPFSDGRAFDAGCFMRYSTTSIFPDNQTTIDITNFVKQGSSRNKGETIGGVVGGVALALILLALFAWIKRRTSDKTMPGGNQLRSDLTGVSKLKGPLTYSYNELMIATKSFSEENKLGEGGFGAVYKGTLKNGKVVAVKKLTTFRSKRVEEDFESEVMLISNVHHRNLVRLLGCCSKGYDRILVYEYMKNSSLDRFLFGKKKGSLNWKQRHDIILGIARGLTYLHEEFPVRIIHRDIKTNNVLLDDDLQAKIADFGLVRLLPENKSHVSTRLAGTLGYTAPEYAIHGQLSEKADIYSYGVVVLEIISGKKCREFNLDLFDEGAFLLQKAWNLYEKGKHIELVDKTVDPKGYDAEEVKKTIEIGLLCTQASADTRPLMSEVVAMLQNKDLLENIKPTMPILIGTDD 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1363 654 ProSiteProfiles Protein kinase domain profile. 360 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1363 654 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 115 650 - -
Lele28g1363 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Lele28g1363 654 Gene3D Transferase(Phosphotransferase) domain 1 437 644 - -
Lele28g1363 654 ProSitePatterns Protein kinases ATP-binding region signature. 366 389 IPR017441 GO:0005524
Lele28g1363 654 FunFam Cysteine-rich receptor-like protein kinase 2 437 641 - -
Lele28g1363 654 Gene3D Phosphorylase Kinase; domain 1 333 436 - -
Lele28g1363 654 ProSiteProfiles Gnk2-homologous domain profile. 166 271 IPR002902 -
Lele28g1363 654 FunFam Cysteine-rich receptor-like protein kinase 2 329 436 - -
Lele28g1363 654 CDD STKc_IRAK 366 635 - -
Lele28g1363 654 Gene3D - 165 270 IPR038408 -
Lele28g1363 654 FunFam Cysteine-rich receptor-like protein kinase 2 168 271 - -
Lele28g1363 654 Pfam Protein tyrosine and serine/threonine kinase 363 632 IPR001245 GO:0004672|GO:0006468
Lele28g1363 654 SUPERFAMILY Protein kinase-like (PK-like) 340 634 IPR011009 -
Lele28g1363 654 Pfam Salt stress response/antifungal 177 268 IPR002902 -
Lele28g1363 654 SMART serkin_6 360 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1363 Lele-ChrLele28 9541309 9548954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1363 115 649 Receptor kinase-like Gene Family AT1G70520 37.982 2.47e-116 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele28g1363 PK_Tyr_Ser-Thr 1.4e-49 CL0016