Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1362 ATGACTTTTTCTTTCTTTCTTTTTGCTATTGTATCAAGGTATGAGAGTAGTGGATTCTTCGATCAGAACACAGACGCCGGAAACAACATAATATGCGGGAATCAGACAATCAGAAACACCACAGGACTTGCTTCAATTGTGCAACAAGTTATAACGGATCTGGACATAGCAACCCCCCGAATCAAAGGTTTCTATGCAGCCACTAAGACGCCATTACCTAATAGTAACGGCTCAAGCATTTATGCCATTGCTCAATGTATTGAAACTCTCACTCAAGTTGGCTGCCAAGATTGCCTCAACATTGCCTTAAGAAATTTTCAGATTTGTCTTCCGAATTCAAATGCTAAGACTTATGATGCTGGCTGTTTCATGAGATACTCCACCACTGCCTTCTTTGCTGATAATCAAGCCGTTAATATTAGGCCCTTCTTGAAACAAGGGCGAGGTGATATTTTAGGAGCAACTGAGTTGAAAGGTCCAATTAATTATAGGTACAACGATCTTAAGAGGGCCACAAAAAATTTCAGTAAAGAAAATAAACTTGGAGAAGGAGGTTTCGGTGATGTATACAAGGGCACTCTAAAAAATGGGAAAGTAGTTGCTGTCAAGAAATTGGCTTTAGGGCAATCCAAACAAATGGAGAAAGATTTTGAGAGTGAGGTGAAATTGATCAGTAACGTCCATCATCGGAATCTTGTTCGACTTCTTGGATGTTGTAGTAAAGGACAAGAGAGGCTACTTGTTTATGAATACATGAGAAACAACAATGTTGGCACATTCTTGTTTGGCAAAAACAAAGGCTCCCTCAATTGGAAACAACGCTATAATATAATTTTAGGCACAGCAAGGGGTTTGGCCTATTTGCATGAGGAATTTCATGTTTGTATTATACATAGAGATATAAAGAACAGTAACATTCTCTTGGATGATGATTTACAACCTAAAATTGCTGATTTTGGGTTAGCAAGACTTCTCCCGCATGACTTAACTCATCTCAACACAAAATTTGCAGGAACAATGGGATATACAGCACCTGAATATGCAATGCATGGACAACTATCAGAGAAAGCCGATACTTATAGCTATGGTGTTGTTGTACTAGAAACCATAAGTGGACAAAAGAGTGGCGAATCAAAGGACGATGTTGATGGTGAATTCCTCCTCCAAAGAGCCTGGAAACTCTTCGATAGAGGCATGCATTTAGAGTTTGTGGACAAAACCTTAGACCCTAGTGAGTACGATGCAGAAGAAGTAAAGAAAATCATAGAGATCGCTTTGCTTTGCACTCAAGCATCTCCTGCAGCGAGGCCAACAATGTCTGAAATTGTAATTATGCTGAAAGGCAAGGGCATAATGGAGAACAGGAGACCAACTATGCCAGTGTATGTGGATCCCAATTTTAATCCCAGAAGAGACTCGTCAACCTCTCATAATTCATCTTCCTCAAATGCCACCGCATCCACTGTTGTTTTATCTGGAAGGTGA 1485 0.3993 MTFSFFLFAIVSRYESSGFFDQNTDAGNNIICGNQTIRNTTGLASIVQQVITDLDIATPRIKGFYAATKTPLPNSNGSSIYAIAQCIETLTQVGCQDCLNIALRNFQICLPNSNAKTYDAGCFMRYSTTAFFADNQAVNIRPFLKQGRGDILGATELKGPINYRYNDLKRATKNFSKENKLGEGGFGDVYKGTLKNGKVVAVKKLALGQSKQMEKDFESEVKLISNVHHRNLVRLLGCCSKGQERLLVYEYMRNNNVGTFLFGKNKGSLNWKQRYNIILGTARGLAYLHEEFHVCIIHRDIKNSNILLDDDLQPKIADFGLARLLPHDLTHLNTKFAGTMGYTAPEYAMHGQLSEKADTYSYGVVVLETISGQKSGESKDDVDGEFLLQRAWKLFDRGMHLEFVDKTLDPSEYDAEEVKKIIEIALLCTQASPAARPTMSEIVIMLKGKGIMENRRPTMPVYVDPNFNPRRDSSTSHNSSSSNATASTVVLSGR 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1362 494 FunFam Cysteine-rich receptor-like protein kinase 2 144 251 - -
Lele28g1362 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Lele28g1362 494 MobiDBLite consensus disorder prediction 464 494 - -
Lele28g1362 494 CDD STKc_IRAK 181 448 - -
Lele28g1362 494 FunFam Cysteine-rich receptor-like protein kinase 2 27 131 - -
Lele28g1362 494 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 17 481 - -
Lele28g1362 494 Gene3D Phosphorylase Kinase; domain 1 151 251 - -
Lele28g1362 494 SUPERFAMILY Protein kinase-like (PK-like) 160 477 IPR011009 -
Lele28g1362 494 Gene3D - 26 131 IPR038408 -
Lele28g1362 494 Gene3D Transferase(Phosphotransferase) domain 1 252 458 - -
Lele28g1362 494 Pfam Salt stress response/antifungal 43 128 IPR002902 -
Lele28g1362 494 Pfam Protein kinase domain 175 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1362 494 ProSiteProfiles Protein kinase domain profile. 175 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1362 494 FunFam Cysteine-rich receptor-like protein kinase 2 252 454 - -
Lele28g1362 494 SMART serkin_6 175 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1362 494 ProSiteProfiles Gnk2-homologous domain profile. 25 131 IPR002902 -
Lele28g1362 494 ProSitePatterns Protein kinases ATP-binding region signature. 181 204 IPR017441 GO:0005524
Lele28g1362 494 MobiDBLite consensus disorder prediction 468 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1362 Lele-ChrLele28 9520565 9523446 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1362 5 494 Receptor kinase-like Gene Family AT1G70520 38.390 6.38e-110 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele28g1362 Pkinase 3.6e-50 CL0016