Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1353 ATGGAGACGATGATGATTCACAGTGGAAGGGAAAAGGGAAGAAGTTCCAGCTTGGTCGATATTGTGTTCTCTTGGACTATTCAAGATGCTCTCAACGATAATCTTTATAAAAACCAGGTGCCAAAGATCCCATTAACGTTTTTGACAGCAACGGAATACATGAAATCCTTTATTCCTTCCCTGATTGAGGAAACACACAGTGATCTGTGTTCAAGCTTGAATGACATTTCCAAAGCCTCTACTTGTGAAATCCTGACATATAAGAGGTTGAAGAAGAAGCAAGGTTTTGTTTATAAGATGACGCTGAATGTGACTATCAATGGTGGACAATATGAACCTGAATCTGGAGATCTCGTCGCCATCGCTGATGGTAGACCAAAAAGCATTGAAGACTTGAACAAACCCAATAGATACTATCATATTGCTTATGTTCAAGGGTCAAATGATGGTCAGATCACGGTACTTTCATCAAAGAACATGGAGATTGAACCAGACATTGGGAGCAAGAAGGCGCAAAAGGTTTATGCTTCGTATCTTATAAACTTGACAACCAATATTCGTATTTGGAGGGCCTTGAACTCACAACTGGAAGGCGCAAACTCGAATATCATTGGAAAAGTTCTGCAACCTGAGACATTGATTGGAAAGAGCAGTCACGTTTGCCCTTCTTTAGAGCACCAAAATACAGACATTTCTATTACAACAAATATAATTAGATCTCAGAATCTGAATAAATGTCAGAAAGATGCTGTATTAAGTAGTGTTAAAATGAGGAAATGCCATCACAATCACACTGTGAAACTTATTTGGGGCCCTCCTGGGACTGGAAAAACAAAGACAGTTGTTTCCATGCTTTATTCCTTTTTCAAACTAAAAACAAGAACATTAACATGTGCTCCCACAAATATTGCTGTGTTGGAAGTGGCTGCTCGCTTGCGTAATTTAGTTAAAGATCAACTTCAGCTTGATACCTATGGTTTGGGTGACATAGTGCTTTTCGGGAATAATTCTCGAATGAAAGTTGATGATTACTGGGGCCTTCCCGATATCTTTCTTGATTATCGCGTTGAAATGCTTGAGCAGTGTCTTTCTCCACTGACTGGATGGAAACATAACTTGGAATCAATGATCAGTTTGATTGAGAAACCTCATGAGCAGTATCTTTTATCTAAGGTTGATGCAAAGTATGAGAAGGTTAATGATCTAATGTCATTAGAAGAATTTATTAAGCTTAATTATATCAGTGTAGAGAAAGCATATCTCTCTTACAAGCAACTTGAAGATAAAGATGATCGTATGACATTGAAGAAATTTGTGAAGAAGAGATACAGTTACATTAATGACCAATACCTTTCTTATAATGCTGAAGTTCAGTTTATAAAGAGGAGGTTCAGTTTCTTAGGTGAGAAACTCAAGTCCTGCTTGCAAACATTGTACTCACAACTACCAACTTACCTTGTTCCTTTTAATGTGGCAAAGAAGATGTGTAGAGCACTGGATTTGCTAGAAACCCTTCAAAATCGTTTGCGTCTAAATGAGTTCATAGAAATTCCCATTCGCAGTTATAATGTTGATGGACAAGGAAACTCTGTCAGCCAACCAGAAATTCCAATTGAGGAGCCTATCCAGGATTCACTTATGCCCATGGGAACAGAAATACCAATAAAAGATGTTACATTTTGCTTTGGAAGGTTAAGATTGGAAAGAGATGAGTTTCTTATGATACTTGGATCACTTGCTCGGTCAACTTCACTTCAACGACTGAAAAGCCAGTATGCAACAAAAGATTTTTGCTTGAAGAAGGCATGCCTAATATTCTGTACTGCTTCGGGTTCTACCAAATTGTTCACTGATGAAATGACACCCATACCCTTTGTAGTTATAGATGAAGCAGCTCAGCTCAAAGAGTGTGAGTCAACCATACCTCTGCAACTTCCTGGCGTAAGACATGCTGTTCTCATAGGTGATGAGATGCAACTTCCTGCAATGGTTAAGAGCAAGATTTCTGATGAAGCTGGATTTGGAAGAAGCATGTTTCAGAGGCTGGTGGAGTTGGGATACAATAAACATCTACTTAATGTCCAGTTTAGAATGCATCCATCTATAAGCTTATTCCCCAATAGGGAATTCTATGAAGGCAAACTAGAGGATGGCATGAATGTCAGAGCTTCAAGCTATAGTAAACTCTTCCTCAAGAGAAAAATGTTTGGCTCCTTTTCTTTTATAAATATAGCTAAGGGCAAAGAGCAATGTGGTCATGGACAGAGCTTGAAGAACATGGTGGAGGTTGCTGCCATCACAGAGATTATAAAAGGGCTTCACAAAGAGTTTCTCAGCGTGAAGAGGAAAGTCAGCATCGGAGTAATATCTCCATATAAGGCTCAAGTTCATGAAATCCAAGAGAAAATGAAGAAAAACAATTTGATTTCAGATGGTGACTTCTCTGTGAATGTTCGTTCTGTTGATGGCTTTCAAGGTGGTGAAGAAGATATCATAATGATCTCCACTGTCAGATCTAATAAGACTGGAAATGTGGGATTTCTTTCTAATAAACAAAGAGCTAATGTGGCTCTTACCCGTGCTAGGCATTGTCTTTGGATATTAGGGAATGCAGGTACTCTAAAACAGAGTTGCTCTGTTTGGAAAAAGTTAGTGAATGATGCCAAGCGAAGAGGGTGCTTCCATAATGCTGATGATGATAAGAACTTGGCTGGAGCCATTAAGGACGCCATACTTGAGCTTGAACTTGTTGATGAATCAAAGTCACCTTTTAAGTCACTCAGTATAAGGGACAAGAAAGACGAGTCACTAACGGGTGCCACAAGTTCCAGCACCAAGATTGACAGCAATCAACTAGAATATCATAGAAGGTTTACATACACTAGACCAGAAGAAGAAAATCTGAGAGTGATGATGGCGAGTTCTTGCAATGGAAAGAGAAGGACGAGCTTGGTAGATATTGTGTTCTCTTGGACTTTTACCGATGCTCTCAACCAAAATCTATATAAAGACCAGGTTCGAAATATTCCTTTAACATTCTTATCAGCAACAGAATACATGAAATCCTTTATTCCTTCACTGATTGAGGAAACACACAGTGATCTATGTTCAAGCTTGAAGGGCATTTCCCAAGCCCCTACTTGTGAAATCCTGACATATAAGAGAATGGGTAAGGGATTGCTCTATCAATTGACATTTGATGAGATTCATGTTGGACGCTATGAACCTCAATCTGGAGATCTCATTGCCATCACTGATAGTAAGCCAAAACGCCTTCAAGACTTGAACATTCCCCCAAGATTTTATCATATTGCTTATGTTCAAGGGTCAAAAAGGGGTCAGATCACAGTACTTTCATCAAAAAACATGGAGATTGAACAAGATATGAGGAGCAATAAGGCCCAAAGGCTTTATGCTGTGTATCTTATCAACTTGACAACCAATATTCGTATTTGGAAGGCCCTGAACTCGCAGTTGGAGGGTGCAAGCTTCAATATTATTGGAAAAGTTCTGCAATCCGATAAATTGATTGGAAAGAGCAGTCACATTTGCCCTTCAGAAGAACACCATAATACAGACATTTCTATTACTAAAAACATTATCAGATCTCAGAATCTGAATGAAAGCCAGAAAGATGCTGTATTAAGTAGTGTTGCAATGAGGAAATGTCATCATAACCACACTGTCAAACTTATTTGGGGCCCACCTGGGACTGGCAAAACAAAGACAGTTGCATCCATGCTATTTTCACTGCTCAAACTAAAAACCAGAACATTAACATGTGCTCCAACCAATACTGCTGTGTTGGAAGTGACAGCCCGCCTGCGCAGTTTAGTCAAAGATCAGCTTCAGTTTGATGGCTATGGTTTGGGTGACATAGTGCTTTTCGGGAATAGTTCTCGAATGAAAGTTGATGATTACTGGGGCCTTCCCGATATCTTTCTTGATTATCGCGTTGAAATGCTTGAGCAGTGTCTTTCTCCACTGACTGGATGGAAACATAACTTGGAATCAATGATCAGTTTGCTTGAGAAACCTCATGAGCAGTATCTTTTATCTAAGGTTGATCCAAAGTATGAGGAGGTTAATGATCTAATGTCATTAGAAGAATTTACTAAGCTTAATTACAGCAGTGTAGAGAAAGCATATCTTTCTTACAAGCAACTTGAAGATAAAGATGATCGTATGACATTGGAGAAATTTGTGAAGAAGAAATACAGTTACGTTAATGACCAATACCTTTCTTATAATGCTGAAGTTCAGTTTATAAAGAGGAGGTTCAGCTTCATTGGTTTGAATCTCAAGTCCAGCTTGCAAACATTATACTCACAATTACCAACTTCCCTTGTCCCATTCGAGGCGGCGAACAACATATGTGTAGCTCTTGATTTGCTTGAAGCCCTTAGAAACTCTTTGAACCGAAACGAGTTCATAGAAATTCCCAGAGGAAATCTAGAGGGAAAAAGTAATGGCATTCAACCAGAAATTCCAAATATGAAAGAGAAGAAATGGGGTTTATTTGACACCTTCACTGGGATAATTCAAAGACTTCTTAAGCCCATAATGCCTTGGCTTATTATGCCTGTGGAAACACATATTCCAATAAAAGATGTTACATTTTGCTTTGGAAGGTTAAGAATGAAAAGAGATGAGTGCCTTGGCGTACTTAGATCACTTTCTCAGTCAATTTCACTTCCTCAAATGGAAAAACGCTTTCAAATAATGGATATTTGCTTGAAGAAGGCATGCCTGATTTTTTGCACTGCATCAGGTTCTACCAAATTGTTCAATGAAGGAATGAGTCCTATACCCTTTGTAGTTATAGATGAGGCAGCTCAGCTCAAAGAGTGTGAGTCAACCATACCTCTGCAACTTCCAGGGGTAAGACATGCTGTTCTCATAGGTGATGAGAGGCAACTTCCTGCAATGGTTAAGAGCAAGATTTCTGAAGAAGCTGGATTTGGAAGAAGCATTTTTGAGAGGCTTGTGTTGCTGGGATTCATGAAGCATATGCTTAAAGTCCAATTTAGAATGCATCCATCCATAAGTTTATTCCCCAATAGGGAATTCTATGAAGGGCAACTAGTGGATGGCATGAATGTAAGATATTCGAGCTATAGTAAATGTTTCCTTGAAGGAAAAAATTACAGCTCCTATTCTTTTATAAACATAGCTCAGGGAAAAGAGCAATTTGGTCATGGACACAGCTTGATGAACATGGTGGAAGTTGCGGCTATCTCTGAGATTATAAAAGGCCTGCACAAAGAGTTCCTGAGCAAGAGAAGGAAACTCAGCATAGGAGTGATATCACCATATAAGGCTCAGGTCCATGAAATCCAACAGAGAGTTAATCAGTACATGGTTTCAGATGGTGACTTCTCTGTGAACGTTCGTTCTGTTGATGGATTTCAAGGTGGTGAAGAAGATATCATAATGATCTCCACTGTCAGATCTAATAAGAGTGGAAATGTGGGGTTTCTTTCTAATAGACAAAGAGCAAATGTGGCTCTTACTCGTGCTAGACATTGTCTGTGGATATTGGGGAATGCAGAAACTCTAGAACAGAGTAGCTCAGTATGGAGAAAGCTAGTGAATGATGCTAAGAGAAGAGAGTGCTTCCATAATGCTGATGATGACCAGAACTTGGCTCAGGCTATTAAGGATGCCTCGCTTGTGCTTGAACTAGTTGATGAATCGAAGTCACCATTTAAATCACCAATTAAAAGGGACAAGGCAAAGAAGTCAGAAACAGGTGCTACAAGTTCCAGAAAGAAGGCTATAATACTGTAA 5790 0.3915 METMMIHSGREKGRSSSLVDIVFSWTIQDALNDNLYKNQVPKIPLTFLTATEYMKSFIPSLIEETHSDLCSSLNDISKASTCEILTYKRLKKKQGFVYKMTLNVTINGGQYEPESGDLVAIADGRPKSIEDLNKPNRYYHIAYVQGSNDGQITVLSSKNMEIEPDIGSKKAQKVYASYLINLTTNIRIWRALNSQLEGANSNIIGKVLQPETLIGKSSHVCPSLEHQNTDISITTNIIRSQNLNKCQKDAVLSSVKMRKCHHNHTVKLIWGPPGTGKTKTVVSMLYSFFKLKTRTLTCAPTNIAVLEVAARLRNLVKDQLQLDTYGLGDIVLFGNNSRMKVDDYWGLPDIFLDYRVEMLEQCLSPLTGWKHNLESMISLIEKPHEQYLLSKVDAKYEKVNDLMSLEEFIKLNYISVEKAYLSYKQLEDKDDRMTLKKFVKKRYSYINDQYLSYNAEVQFIKRRFSFLGEKLKSCLQTLYSQLPTYLVPFNVAKKMCRALDLLETLQNRLRLNEFIEIPIRSYNVDGQGNSVSQPEIPIEEPIQDSLMPMGTEIPIKDVTFCFGRLRLERDEFLMILGSLARSTSLQRLKSQYATKDFCLKKACLIFCTASGSTKLFTDEMTPIPFVVIDEAAQLKECESTIPLQLPGVRHAVLIGDEMQLPAMVKSKISDEAGFGRSMFQRLVELGYNKHLLNVQFRMHPSISLFPNREFYEGKLEDGMNVRASSYSKLFLKRKMFGSFSFINIAKGKEQCGHGQSLKNMVEVAAITEIIKGLHKEFLSVKRKVSIGVISPYKAQVHEIQEKMKKNNLISDGDFSVNVRSVDGFQGGEEDIIMISTVRSNKTGNVGFLSNKQRANVALTRARHCLWILGNAGTLKQSCSVWKKLVNDAKRRGCFHNADDDKNLAGAIKDAILELELVDESKSPFKSLSIRDKKDESLTGATSSSTKIDSNQLEYHRRFTYTRPEEENLRVMMASSCNGKRRTSLVDIVFSWTFTDALNQNLYKDQVRNIPLTFLSATEYMKSFIPSLIEETHSDLCSSLKGISQAPTCEILTYKRMGKGLLYQLTFDEIHVGRYEPQSGDLIAITDSKPKRLQDLNIPPRFYHIAYVQGSKRGQITVLSSKNMEIEQDMRSNKAQRLYAVYLINLTTNIRIWKALNSQLEGASFNIIGKVLQSDKLIGKSSHICPSEEHHNTDISITKNIIRSQNLNESQKDAVLSSVAMRKCHHNHTVKLIWGPPGTGKTKTVASMLFSLLKLKTRTLTCAPTNTAVLEVTARLRSLVKDQLQFDGYGLGDIVLFGNSSRMKVDDYWGLPDIFLDYRVEMLEQCLSPLTGWKHNLESMISLLEKPHEQYLLSKVDPKYEEVNDLMSLEEFTKLNYSSVEKAYLSYKQLEDKDDRMTLEKFVKKKYSYVNDQYLSYNAEVQFIKRRFSFIGLNLKSSLQTLYSQLPTSLVPFEAANNICVALDLLEALRNSLNRNEFIEIPRGNLEGKSNGIQPEIPNMKEKKWGLFDTFTGIIQRLLKPIMPWLIMPVETHIPIKDVTFCFGRLRMKRDECLGVLRSLSQSISLPQMEKRFQIMDICLKKACLIFCTASGSTKLFNEGMSPIPFVVIDEAAQLKECESTIPLQLPGVRHAVLIGDERQLPAMVKSKISEEAGFGRSIFERLVLLGFMKHMLKVQFRMHPSISLFPNREFYEGQLVDGMNVRYSSYSKCFLEGKNYSSYSFINIAQGKEQFGHGHSLMNMVEVAAISEIIKGLHKEFLSKRRKLSIGVISPYKAQVHEIQQRVNQYMVSDGDFSVNVRSVDGFQGGEEDIIMISTVRSNKSGNVGFLSNRQRANVALTRARHCLWILGNAETLEQSSSVWRKLVNDAKRRECFHNADDDQNLAQAIKDASLVLELVDESKSPFKSPIKRDKAKKSETGATSSRKKAIIL 1929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1353 1929 Gene3D - 1116 1477 IPR027417 -
Lele28g1353 1929 CDD SF1_C_Upf1 698 889 IPR041679 -
Lele28g1353 1929 Gene3D - 158 695 IPR027417 -
Lele28g1353 1929 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1205 1887 IPR027417 -
Lele28g1353 1929 Gene3D - 1541 1675 IPR027417 -
Lele28g1353 1929 MobiDBLite consensus disorder prediction 1902 1920 - -
Lele28g1353 1929 Pfam Domain of unknown function (DUF6469) 110 194 IPR045529 -
Lele28g1353 1929 Pfam Domain of unknown function (DUF6469) 1073 1157 IPR045529 -
Lele28g1353 1929 CDD SF1_C_Upf1 1678 1868 IPR041679 -
Lele28g1353 1929 PANTHER DNA2/NAM7 HELICASE FAMILY 1000 1909 IPR045055 -
Lele28g1353 1929 FunFam P-loop containing nucleoside triphosphate hydrolase 1676 1883 - -
Lele28g1353 1929 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 242 885 IPR027417 -
Lele28g1353 1929 Gene3D - 697 908 IPR027417 -
Lele28g1353 1929 Gene3D - 1677 1888 IPR027417 -
Lele28g1353 1929 FunFam P-loop containing nucleoside triphosphate hydrolase 696 904 - -
Lele28g1353 1929 Pfam AAA domain 675 871 IPR041679 -
Lele28g1353 1929 Pfam AAA domain 1655 1850 IPR041679 -
Lele28g1353 1929 Pfam AAA domain 587 667 IPR041677 GO:0004386
Lele28g1353 1929 Pfam AAA domain 1205 1283 IPR041677 GO:0004386
Lele28g1353 1929 Pfam AAA domain 243 323 IPR041677 GO:0004386
Lele28g1353 1929 Pfam AAA domain 1557 1647 IPR041677 GO:0004386
Lele28g1353 1929 MobiDBLite consensus disorder prediction 1902 1929 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1353 Lele-ChrLele28 9368017 9384497 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g1353 28 9368017 9384497 Lele01g1072 01 6265419 6268350 CCT
Lele28g1353 28 9368017 9384497 Lele02g1098 02 6945959 6948547 CCT
Lele28g1353 28 9368017 9384497 Lele03g1077 03 6258789 6263863 CCT
Lele28g1353 28 9368017 9384497 Lele04g1086 04 6811529 6814602 CCT
Lele25g1360 25 9429492 9430924 Lele28g1353 28 9368017 9384497 hybridization
Lele26g1367 26 9332148 9338237 Lele28g1353 28 9368017 9384497 hybridization