Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1341 ATGGGCTGGCTGGTGGTTTCTGCAGCTATGGCCATTAATGATCAAAATGGAGTTACCAGATCTCACGGCAGTATTCCAGTAGGAAATGGAGTATCTTTGAGCTCTGGACTACATTCTGTTGCACGGGTTCATCTAAATGATCAGTTTTCTTGTGGTAATGATTATGCTCCAAAGGTAAGGAAACCGTATACTATCACAAAACAAAGGGAGAGATGGACAGATGAAGAGCACAAGAAGTTTCTTGAAGCTTTAAAGCTGCACGGCCGGGCATGGCGAAAGATTGAAGAACATGTTGGCACAAAGACTACCGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGGTTCTTCGTGATCCTTGTGGGAACAATACAAACTCAATGGAGTCCATTGAAATTCCACCCCCACGTCCAAAACGAAAGCCTATGCATCCTTACCCTCGTAAGCTGGTGGAGCTCCCGAACAAAGAGGCTTCCATACCAAAACAGCTAACGATGTCTAATTCTCTGAAATCATCAGATTTTGACCAAGAAAACCAATCTCCCAAGTCAGTGTTATCTGCAGTTGGTTCAGACACCCTTGGTTCCTCTGATTCAGAAACACCAAATGGAAGCTCATCCCCAATTTCATCCAGTAGTGCTGTTCATATCAACAACTTTGTAGTTGCTGAACCTGAAAACCTACAATTGGAGGCGGACGTGGGTCCACCATCGGCTGGACTAAATGCAGATCCAACTCTTCTTGACGAGCAACCACTTATGAAGCATGAACTTCTCCAGAAAGAAAGCATATCAACCAAAGAAGATGCTGCAGACGAATCATCTGCTCGGATTCTGAAGCTTTTTGGGACGACTTTGTTGGTAACAGATAACTGCGGGCCATCCTCTCCAACAATGGAAGCATGCAAGTTGATTCACTCAAAAGTTGTTCAATGTTGGAGTATTCCCCACATAAGATCACTGCACGAGAAGGTGCCTGGAGGAAAACAACAACTAGATTCCAATGTTATGGAAATTGAAGATGTAGAAGTTAAAAATGAAGGATCTTTGACTAATCCAAGCACTAGCTCTTGTGTAAATAAGGATGAAAGTTCAGATATGGAAGCCCAAATAGAAACTAAGGTTATATTTGATCTGAAGAAGTGTGGGAAAGGGTTTGTGCCATATAAGAGGTGTATTGCAGAGAAGGAAAACCAGGCCTCAGCAGTAACCAAAGAGGGGAGGGAAGAACAACGAATTCGCATTTCCTTGTAA 1257 0.4288 MGWLVVSAAMAINDQNGVTRSHGSIPVGNGVSLSSGLHSVARVHLNDQFSCGNDYAPKVRKPYTITKQRERWTDEEHKKFLEALKLHGRAWRKIEEHVGTKTTVQIRSHAQKFFSKVLRDPCGNNTNSMESIEIPPPRPKRKPMHPYPRKLVELPNKEASIPKQLTMSNSLKSSDFDQENQSPKSVLSAVGSDTLGSSDSETPNGSSSPISSSSAVHINNFVVAEPENLQLEADVGPPSAGLNADPTLLDEQPLMKHELLQKESISTKEDAADESSARILKLFGTTLLVTDNCGPSSPTMEACKLIHSKVVQCWSIPHIRSLHEKVPGGKQQLDSNVMEIEDVEVKNEGSLTNPSTSSCVNKDESSDMEAQIETKVIFDLKKCGKGFVPYKRCIAEKENQASAVTKEGREEQRIRISL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1341 418 MobiDBLite consensus disorder prediction 161 212 - -
Lele28g1341 418 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Lele28g1341 418 SMART sant 68 116 IPR001005 -
Lele28g1341 418 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Lele28g1341 418 FunFam protein REVEILLE 6 isoform X1 71 119 - -
Lele28g1341 418 MobiDBLite consensus disorder prediction 124 212 - -
Lele28g1341 418 CDD SANT 71 114 IPR001005 -
Lele28g1341 418 ProSiteProfiles SANT domain profile. 67 118 IPR017884 -
Lele28g1341 418 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Lele28g1341 418 SUPERFAMILY Homeodomain-like 63 116 IPR009057 -
Lele28g1341 418 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 67 116 IPR006447 GO:0003677
Lele28g1341 418 MobiDBLite consensus disorder prediction 135 152 - -
Lele28g1341 418 Gene3D - 71 117 - -
Lele28g1341 418 PANTHER SWI/SNF COMPLEX-RELATED 41 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1341 Lele-ChrLele28 9214932 9218205 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele28g1341 Myb_DNA-binding 9.7e-14 CL0123