Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1332 ATGCCCTTGGAAGCAGGGATTTTCATTGAGACACCACCTGCTTCTTCTTCTTCGTCTCCTCCTGATCTTTCTCTTCACATAAGCCCTCCATCAACCTCTTCTTCTTTGATTTGCAGCAACAACAACTATGAAGCTCGGCACTACAGTACTAATAATTCTTCTTCTTTATCTGTCTCTCAATCTCTTCATGCCCACACTGAACTCTCTCTCGGAAGCAATTTCACTTCTTGTGCAACCACACAAGAACCAGTGACCAAAAACAGCAACTGCAACCCTTATTTTCAGAGCCACCATCATCACCATTTACTCCACCACCACCACCACCAGAATCCAAATTTGAATAACTATGGAGTCTCATTGCTTGATGTGCCTCCTTCTTCTTCATCGGACGGTTTGAGGCCCATCAAAGGGATTCCGGTCTATCACAACCGTTCCTTCCCTTTCTTGCCTGCGGTGGACCAAAACCACAAGGATAATCATCATCATCAACAGCAGCAGCAAACCAAGATGTGCTTCTACAATCCTTCTTTCCCTTCTTCTTCTTCTCCTTCGGGTTCTCCGTACATGGCAGTGGCCGCCGGGGGGTTGGATCCCATGTCGGCGGCGGCGTATAGGGCGGGGGTCACCGGCAGGTTTAATGGTATTTCCGGAGATGCTTTCAAATCTCATCATCATCATCACCATCAGTATGGGATGGTCGGGCCATCTTCACATGACGCGTCTGCAAGTAGTGGGTTCATGAGATCCAGATTCTTGCCCAAGCTTCCCACTAAACGCAGCATGAGAGCTCCCAGAATGCGGTGGACCACCACCCTCCACGCTCGTTTCGTTCACGCCGTCGAGCTTCTCGGTGGCCATGAAAGGGCAACTCCGAAATCAGTTCTAGAGCTGATGGATGTGAAGGATCTTACATTAGCTCATGTCAAAAGCCATTTACAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCAGCTTCTTCAGGCCACTCAGATGGGTCTGGAGAAGATGACATATTTGCAGATCAAAGAGGAAGCAGAACAGATCGATCAGTGCAGCATGATATGGACTACTCTTCAACCACCACTACTCTATGGAGCAATTCTTCAAGTAGAACAGAGCAATGGCTACAAAATGGTACCAAAGACATCGATGATCTCAGACCTCCTCCTGCCTTCCAGACACCCCCACTATCATCGTCAGGCCATCAAATTCAGGAGTGTGATTTAAATTCAAGGCATGTGAAGAACAACAACATAGCAAGCTCTAATTTGGAGTGCAAGAACCCAAGCTTGGAGTTTACGTTAGGAAGACCAGATTGGAATGGCAAATGA 1335 0.4742 MPLEAGIFIETPPASSSSSPPDLSLHISPPSTSSSLICSNNNYEARHYSTNNSSSLSVSQSLHAHTELSLGSNFTSCATTQEPVTKNSNCNPYFQSHHHHHLLHHHHHQNPNLNNYGVSLLDVPPSSSSDGLRPIKGIPVYHNRSFPFLPAVDQNHKDNHHHQQQQQTKMCFYNPSFPSSSSPSGSPYMAVAAGGLDPMSAAAYRAGVTGRFNGISGDAFKSHHHHHHQYGMVGPSSHDASASSGFMRSRFLPKLPTKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDDIFADQRGSRTDRSVQHDMDYSSTTTTLWSNSSSRTEQWLQNGTKDIDDLRPPPAFQTPPLSSSGHQIQECDLNSRHVKNNNIASSNLECKNPSLEFTLGRPDWNGK 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1332 444 SUPERFAMILY Homeodomain-like 261 317 IPR009057 -
Lele28g1332 444 Gene3D - 263 320 - -
Lele28g1332 444 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 21 443 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lele28g1332 444 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 264 317 IPR006447 GO:0003677
Lele28g1332 444 MobiDBLite consensus disorder prediction 355 380 - -
Lele28g1332 444 MobiDBLite consensus disorder prediction 1 32 - -
Lele28g1332 444 FunFam Myb family transcription factor 262 320 - -
Lele28g1332 444 MobiDBLite consensus disorder prediction 11 32 - -
Lele28g1332 444 MobiDBLite consensus disorder prediction 335 354 - -
Lele28g1332 444 MobiDBLite consensus disorder prediction 319 404 - -
Lele28g1332 444 Pfam Myb-like DNA-binding domain 265 316 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1332 Lele-ChrLele28 9065739 9070371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1332 1 444 G2-like Transcription Factor Family AT5G16560 42.251 3.45e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele28g1332 Myb_DNA-binding 2.3e-05 CL0123