Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele28g1314 | ATGTTCCCTGAAGCTCTATCCCTCATGCGATTCTTAGTGTCTTGGAAAGGAAAGGACTCTGCTTCTTTATTGTTTGCGTCTGTTCTTCAAACAAGAGGTACCCACCAATCCAATATTGTATTTGATGTTTTAATTCATGCTTATTTGGATTCTGGATTTGTTGCGGATGCCATTCAATGTTTTCGGTTGGCTAGGACAAATAATATCTTCAAGTCCCACTTCATTCTTGTGTGTGCAGGGGTTCGAGATTTGAAAGAGGCCAGGAAGCTTCTATACGAGATGGGTGCAAATGGATTGAAGCCTGACAATATCACCTTCACTACGCTAATAGATGGATTTTGTAAGGATGGAGATCTTGAAGTGCCCTTGGAGATCAAGGAGAGAATGATTGAAGAAGACGCAATGCTTAATTTGGGGCTAGTTCCAGATGATATCACATTTAGCATTTTGCTAGAAGGTCATTGCAAGCATGGTAGTCCTGAAGAAATTGAGCTATTTAGAAGTGAGAAAGGACTTATTACAGATTATACTTCTTATACTGCACTTCTTAGTGAAGCAAGTAAAGTTTCCAAAGATCGCAGAAAGAGATGA | 591 | 0.3959 | MFPEALSLMRFLVSWKGKDSASLLFASVLQTRGTHQSNIVFDVLIHAYLDSGFVADAIQCFRLARTNNIFKSHFILVCAGVRDLKEARKLLYEMGANGLKPDNITFTTLIDGFCKDGDLEVPLEIKERMIEEDAMLNLGLVPDDITFSILLEGHCKHGSPEEIELFRSEKGLITDYTSYTALLSEASKVSKDRRKR | 196 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele28g1314 | 196 | Pfam | PPR repeat | 139 | 159 | IPR002885 | - | |
Lele28g1314 | 196 | Pfam | PPR repeat | 97 | 129 | IPR002885 | - | |
Lele28g1314 | 196 | Pfam | PPR repeat | 40 | 67 | IPR002885 | - | |
Lele28g1314 | 196 | Gene3D | Tetratricopeptide repeat domain | 134 | 195 | IPR011990 | GO:0005515 | |
Lele28g1314 | 196 | Gene3D | Tetratricopeptide repeat domain | 4 | 133 | IPR011990 | GO:0005515 | |
Lele28g1314 | 196 | TIGRFAM | PPR: pentatricopeptide repeat domain | 104 | 133 | IPR002885 | - | |
Lele28g1314 | 196 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 102 | 136 | IPR002885 | - | |
Lele28g1314 | 196 | PANTHER | ATPASE EXPRESSION PROTEIN 3 | 19 | 187 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele28g1314 | Lele-ChrLele28 | 8902227 | 8903609 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele28g1314 | 35 | 188 | Glycosyltransferase | AT1G05670 | 28.743 | 9.32e-13 | 64.3 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele28g1314 | 28 | 8902227 | 8903609 | Lele25g1330 | 25 | 9093551 | 9097052 | CCT | |
Lele28g1314 | 28 | 8902227 | 8903609 | Lele26g1340 | 26 | 9060684 | 9069978 | CCT | |
Lele28g1314 | 28 | 8902227 | 8903609 | Lele28g1331 | 28 | 9049811 | 9059106 | CCT | |
Lele25g1315 | 25 | 8973583 | 8975394 | Lele28g1314 | 28 | 8902227 | 8903609 | hybridization | |
Lele26g1322 | 26 | 8913265 | 8914708 | Lele28g1314 | 28 | 8902227 | 8903609 | hybridization |