Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1307 ATGAATTCTCTGCTTCCGCTTAACATCTTGGTTCCTGCTTTGTCGCTGTTTCTGTTCGCCATCGTAGGCGCAGATCTAGCTTCTGATAGAGCCGCTTTGGTGGCTCTGCGTGGTGCCGTTGGTGGCCGTTCCCTTCTCTGGAACCTGTCTCAGACGAGTCCTTGCTTATGGACGGGGGTGTTCTGTGAAAATTCTGGGAAGAACAGGGTCACTACGTTGCGGCTGCCTGGTATGGGTCTTTCCGGGAGACTTCCACTGGGAATTGGGAATCTCACTGAGCTTCAGACTCTGTCTCTTCGCTTTAACGCGCTCTCTGGGCCGATTCCTGGCGACTTTGCTAATCTTGTCAACCTTCGAAATCTTTATTTGCAGGGGAATTTCTTCTCTGGAGAAATCCCCGATTTCTTTTATGGTATGCAGAACTTGGTTCGTTTGAATTTAGCTAAAAACAATTTCAGTGGTGAGATCTCGCCTAACTTTAACAACCTCACGAGGTTAGATACCCTCCTTTTGGAGAACAATCAGCTCACTGGGTCCATTCCCGACCTGACTGCTCCTCCTCTTGATCAGTTTAATGTTTCATCGAATCGGCTCAACGGGTCCATTCCCGCGAAGTTCTCGCACTTAGATGCGAGTGCATTTTCGGGGAATTTGTTTCTTTGTGGGAAGCCCTTGCAAGAATGCCCTGGAACGGAGGGTGGAAAGAAGAAGAAGAAGTTATCTGGTGGAGCAATTGCTGGAATTGTAATTGGTTCAGTGGTCGGACTTCTGTTGATTTTACTTCTGTTCTTCTTGTGCTGTAAAAGGAGCAGTAAAGACAAGAATTCGAGGGATACAACACCTGGTAAGAGCGTCGAGGTTGAAATTCCTCAAGAAAAGACAACAAGAGATATTGAGAATTCTGGAGCAAGTTATTCAGCAACGGCCAGAGGTGGTGGTGATGCTAAGACTGGTAGGAGTAAGAGATTGGTGTTTTTTGGTAATGTCAGCAAAGTGTTTGATCTTGAGGATTTATTAAGGGCATCAGCAGAAGTACTGGGGAAGGGCACCTTCGGAACCACATATAAGGCTACTTTGGAAATGGGGGTGGCAGTGGCCGTGAAGAGGTTGAAGGATGTAACTGCTCCAGAAAACGAATTCAGAGAGAAAATTGAGCAAGTGGGGAAGATGGTTCATGATAACTTAGTCCCGCTCAGAGCTTACTATTATAGCAACGAAGAAAAGCTTCTTGCCTATGATTACATGCCCATGGGAAGCTTATCAGCCCTTTTGCATGCTAATAACGGAGCTGGCAGAACCCCACTAAACTGGGAAACAAGGTCTCGCATTGCCCTTGGTGCTGCACGTGGGATTTCATACCTACACTCACATGGCCCATCTGCCTCCCATGGAAATATTAAGTCATCAAACATCCTTCTCACCAAATCTTTTGAAGCTCGTGTGTCTGACTTTGGCCTTGCTCATCTTTCACTCCCAACTTCAACCCCGAACCGTGTTTATGGTTACCGAGCCCCGGAGGTAACAGATGTTCGCAAAGTATCCCAAAAGGCAGATGTCTACAGCTTTGGTATAATGCTCTTGGAGCTGCTTACTGGGAAAGCTCCAACACATTCCTCGTTGAATGAAGAAGGGGTGGATCTCCCGAGATGGGTCCAATCTATTGTTCAAGAGGAGTGGAACACTGAGGTTTTTGACATGGAGCTTCTCAGATACCAGAATGTTGAGGAGGAGATGGTCAAGCTCTTGCAGCTTGCACTTGAATGTACTGAACAATATCCCGACAATCGACCCTCAATGGATGCGGTGGCGAGCAGAGTTGAGGACATTTGTCATGCCAGTTTAGAGAAAGAGGAAGAGAAGATTCAGTCATTGACAGATCCAGATAGTGGATATTCCCCACCTTGA 1905 0.4682 MNSLLPLNILVPALSLFLFAIVGADLASDRAALVALRGAVGGRSLLWNLSQTSPCLWTGVFCENSGKNRVTTLRLPGMGLSGRLPLGIGNLTELQTLSLRFNALSGPIPGDFANLVNLRNLYLQGNFFSGEIPDFFYGMQNLVRLNLAKNNFSGEISPNFNNLTRLDTLLLENNQLTGSIPDLTAPPLDQFNVSSNRLNGSIPAKFSHLDASAFSGNLFLCGKPLQECPGTEGGKKKKKLSGGAIAGIVIGSVVGLLLILLLFFLCCKRSSKDKNSRDTTPGKSVEVEIPQEKTTRDIENSGASYSATARGGGDAKTGRSKRLVFFGNVSKVFDLEDLLRASAEVLGKGTFGTTYKATLEMGVAVAVKRLKDVTAPENEFREKIEQVGKMVHDNLVPLRAYYYSNEEKLLAYDYMPMGSLSALLHANNGAGRTPLNWETRSRIALGAARGISYLHSHGPSASHGNIKSSNILLTKSFEARVSDFGLAHLSLPTSTPNRVYGYRAPEVTDVRKVSQKADVYSFGIMLLELLTGKAPTHSSLNEEGVDLPRWVQSIVQEEWNTEVFDMELLRYQNVEEEMVKLLQLALECTEQYPDNRPSMDAVASRVEDICHASLEKEEEKIQSLTDPDSGYSPP 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1307 634 Pfam Protein kinase domain 343 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1307 634 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Lele28g1307 634 FunFam Probable inactive receptor kinase At1g48480 415 617 - -
Lele28g1307 634 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Lele28g1307 634 SUPERFAMILY Protein kinase-like (PK-like) 344 604 IPR011009 -
Lele28g1307 634 CDD STKc_IRAK 346 609 - -
Lele28g1307 634 MobiDBLite consensus disorder prediction 271 317 - -
Lele28g1307 634 FunFam Probable inactive receptor kinase RLK902 26 184 - -
Lele28g1307 634 Coils Coil 571 591 - -
Lele28g1307 634 SUPERFAMILY L domain-like 48 226 - -
Lele28g1307 634 Gene3D Ribonuclease Inhibitor 186 232 IPR032675 -
Lele28g1307 634 Gene3D Transferase(Phosphotransferase) domain 1 415 629 - -
Lele28g1307 634 Gene3D Ribonuclease Inhibitor 27 185 IPR032675 -
Lele28g1307 634 ProSiteProfiles Protein kinase domain profile. 340 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1307 634 Gene3D Phosphorylase Kinase; domain 1 312 414 - -
Lele28g1307 634 FunFam pollen receptor-like kinase 1 310 414 - -
Lele28g1307 634 PANTHER OS05G0588300 PROTEIN 14 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1307 Lele-ChrLele28 8822339 8824944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1307 25 609 Receptor kinase-like Gene Family AT1G48480 60.258 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele28g1307 Pkinase 5.2e-36 CL0016