Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1287 ATGTCCTCCGCCAGAATTCAACCCACGGCATGTGCTCTCTGCGCCTCCGCTCCCACCCTTCCATTTCTTCCCTTTGTTTCAACCATTGCGCAATTCGTGGCCATGGCACTCTCTGGAGGACCCTTAGGGTTTCTATGTCTTCTGCTTCTTCTTCGTCCAGCCATCTTCAGATTTGCGTCAAAGATTCTTTTACCACTCCCGGCAAGCTTGGCGACTGTAATGGATTTACCTCTCTTTGATGCTGTTAATTGGTCTCTATACCAAGGTTGGATGCGTCAGCACCTTACATACCTAAAGTGGTATTGCCAAGTAGCTTTGGACCCGTGTGTATGCTTGGAGGATTTCATCGACCCACCAATATATATCAGGGCATGGCACTCGCCTAAAGTAGATTTATTCACTTTTAGGTTTGGTTTTATGTTCCAAATATATGACTGGGTTGTCGAGTTGTCGGGTAGTGGTATCTCTCTGCTACCTACAACTGAGTCCTCTAGTGGAAGATCCTTGGGAGAGAGTGACGGCGCACAAGGAGAAAATATTAAAATGGATGGTTTTGCAAAAGTAATGGATTTAGTGTGTCTGTTCTTTAGAGTGATGGGTTTATCTAGCCCCTTTTGCCAAAGAATATTGCTGACATTGGAGGAAAAGGATCTACCTTATGAGATGGAGTTGGTGGATCTGAAACACAAGCCTGAATGATCCTATAATTCTACAGTTTCAGATGTTGTTGCACAAGCATTGGAAGAGAAGTTTCCTAGCCCACCATTGGGAACCCCACCTGAAAAGGCATCAGTATTTGAAAGCAAAGATCCAAATGATGGGACAGAGCAAGCCTCATTAAGTGAACTAGGCTCTTTGAATGATTACCTCAAGGAAAATCACAGAATCCTCTATTCTGATGTACCTGTGCTGGTTTCTTCCCTTCTTGTTGGTCCTTTTATCAATGGGAAAGACATATCTGCAGTAGACTTATCCCTTGGACCAAAGCTATACCACATGGAGATTGCTTTGGGACATTTTAAGAAATGGACGGTTCCTGATTCCCTCCCCTCTGTGAAGTCTTGTATGAAGGACCTGATTAATTCTGTGGCAATCATATCCATACGAACACTTAGCTAG 1119 0.4397 MSSARIQPTACALCASAPTLPFLPFVSTIAQFVAMALSGGPLGFLCLLLLLRPAIFRFASKILLPLPASLATVMDLPLFDAVNWSLYQGWMRQHLTYLKWYCQVALDPCVCLEDFIDPPIYIRAWHSPKVDLFTFRFGFMFQIYDWVVELSGSGISLLPTTESSSGRSLGESDGAQGENIKMDGFAKVMDLVCLFFRVMGLSSPFCQRILLTLEEKDLPYEMELVDLKHKPEXSYNSTVSDVVAQALEEKFPSPPLGTPPEKASVFESKDPNDGTEQASLSELGSLNDYLKENHRILYSDVPVLVSSLLVGPFINGKDISAVDLSLGPKLYHMEIALGHFKKWTVPDSLPSVKSCMKDLINSVAIISIRTLS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1287 372 MobiDBLite consensus disorder prediction 250 278 - -
Lele28g1287 372 CDD GST_N_family 203 235 - -
Lele28g1287 372 Gene3D Glutaredoxin 200 239 - -
Lele28g1287 372 Gene3D - 260 366 - -
Lele28g1287 372 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 203 362 IPR044627 GO:0033355|GO:0045174|GO:0098869
Lele28g1287 372 SUPERFAMILY Thioredoxin-like 201 252 IPR036249 -
Lele28g1287 372 Pfam Glutathione S-transferase, N-terminal domain 202 232 IPR004045 -
Lele28g1287 372 SUPERFAMILY GST C-terminal domain-like 280 361 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1287 Lele-ChrLele28 8647154 8655466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1287 204 369 Glutathione S-transferase Gene Family AT5G16710 49.223 1.29e-52 173
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g1287 28 8647154 8655466 Lele25g1286 25 8689563 8691365 CCT
Lele28g1287 28 8647154 8655466 Lele26g1295 26 8586761 8588554 CCT
Lele28g1287 28 8647154 8655466 Lele27g0800 27 16078070 16079872 CCT
Lele28g1287 28 8647154 8655466 Lele28g1286 28 8625373 8627151 CCT
Lele28g1287 28 8647154 8655466 Lele28g1287 28 8647154 8655466 ECH
Lele25g1288 25 8706712 8710684 Lele28g1287 28 8647154 8655466 hybridization
Lele26g1296 26 8608679 8613008 Lele28g1287 28 8647154 8655466 hybridization