Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1275 ATGGGGTTTTCCCAAGAAACCTGCACTGATTCTTGGGAGTCTTCAAATCCACAAAATGCTAATGATACAGCCGCAGATCACCACTACGACTATAAAAAGCTCAAATTCAGAAGCACTTGGAGAAAAATGGTCTGGATGATTGGGTTTGCCTGCATTACCCTCCCTCGCCGGCGGCGGCGGAACGCGGGGTTGATTCAGGGTCAAGACAAAAACAAGGCGTGGCTACTGGCGGAGTCCGGCGGGTGTCTGGCGGAGTCAACGAATGCCGACCCACAATCTGTTCACTCATCTTTCAGATTCAATATATGTTCTCAGGTTGAGCTGGAATCTCTGGAAATGAGTTCTTCCGCTGCTGCGACGGTCTTGATGGTGAATTTGGATAATGGGGTGAGTGAGGTTAGTGAATCTCGAGCTCGGAAGCTAAAATGGTGGAGAATAGATTCATTGAACAAAAGCATATTTCCAGTAAACAATACTCTGATCAGATTCAACTACAGTGAAATCCTCTCTGCTACCCATAATTTCTCCAAAGGAAGAGTATTGGGAAGAGGGGCTTTGAGCTGTGTTTTCAGAGGCAAAATTGGAATTCTGAGAAGTGCTGTGGCAATTAAGAGACTGGACAAAGAAGACAAGGAATGCTCAAAATCATTCTGTAGAGAATTGATGATTGCTAGCTCTCTTCACAACCCAAACGTTGTTCCTCTTGTAGGGTTTTGTGCTGATCCAGAAGAGGGTTTGTTTCTGGTTTACAAATTTGTCTCAGGAGGAAACTTAGAGCGCCATTTGCATGGGAAGAAGAAGGATGTCAAGGGAAATTCACCACTGCCTTGGTCTGTGAGGTATAAAGTTGCAGTTGGGATAGCAGAAGCAATTTCTTATCTGCATAATGGAACCAAAAGATGTGTTGTTCATAGAGACATTAAGCCTTCTAACATTCTTCTTTCCTCTAGAAAATCTCCCAAGCTATGTGATTTTGGATTAGCTACATGGACTTCAGCACCTTCAATACATTTCCTTTGCAAAACTGCTAAACCATTGCTTCATCAGAAAGGGAAAGAAGCCATTGAAGAGCTACTTGATCCTCAACTCAATTGCACCTTAAAATCCTCGAAACTGATATCTCGAATGATCGAAGCTGCAGCAGCCTGTGTCACAAACGAAGAATCTCGGAGACCCGGCATTAACGAGATCATCGCGATGCTGAAAGGTCAAGAATCAATCTTATCTAAAAGAAGGAAGCATTCTCTTCATGCTAATGGATCCGTAATTGATTCTTATCCTCAGTTACAAGAAACAAACACAGAGATCAAAGGTCACTTGGCTTTGGCAATGTTAGGTGTTTCAGAGTTTGAGGATGATGATTACCTCTTTGGTCGTTAA 1380 0.4312 MGFSQETCTDSWESSNPQNANDTAADHHYDYKKLKFRSTWRKMVWMIGFACITLPRRRRRNAGLIQGQDKNKAWLLAESGGCLAESTNADPQSVHSSFRFNICSQVELESLEMSSSAAATVLMVNLDNGVSEVSESRARKLKWWRIDSLNKSIFPVNNTLIRFNYSEILSATHNFSKGRVLGRGALSCVFRGKIGILRSAVAIKRLDKEDKECSKSFCRELMIASSLHNPNVVPLVGFCADPEEGLFLVYKFVSGGNLERHLHGKKKDVKGNSPLPWSVRYKVAVGIAEAISYLHNGTKRCVVHRDIKPSNILLSSRKSPKLCDFGLATWTSAPSIHFLCKTAKPLLHQKGKEAIEELLDPQLNCTLKSSKLISRMIEAAAACVTNEESRRPGINEIIAMLKGQESILSKRRKHSLHANGSVIDSYPQLQETNTEIKGHLALAMLGVSEFEDDDYLFGR 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1275 459 SUPERFAMILY Protein kinase-like (PK-like) 163 411 IPR011009 -
Lele28g1275 459 Pfam Protein kinase domain 176 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1275 459 MobiDBLite consensus disorder prediction 1 23 - -
Lele28g1275 459 ProSiteProfiles Protein kinase domain profile. 175 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1275 459 Gene3D Phosphorylase Kinase; domain 1 160 252 - -
Lele28g1275 459 SMART serkin_6 175 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1275 459 FunFam probable serine/threonine-protein kinase PBL7 136 252 - -
Lele28g1275 459 MobiDBLite consensus disorder prediction 1 24 - -
Lele28g1275 459 Gene3D Transferase(Phosphotransferase) domain 1 253 345 - -
Lele28g1275 459 PANTHER OS01G0253100 PROTEIN 339 406 IPR045271 -
Lele28g1275 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1275 Lele-ChrLele28 8519748 8522480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1275 162 328 Receptor kinase-like Gene Family AT5G65600 40.719 5.88e-35 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele28g1275 Pkinase 1.3e-28 CL0016