Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1272 ATGGACATTTCTTCTCCCTCTTCCTCTCCCTCCTCCTACGGCGCTCTCAGTCCTGACTCCAATCTCGATGCCGACACTCCCCGAACCCCCCTAGCCGTCCGTCGAGCCCTCCAGCTCCTGCAATCTGACGTCCCCGATCTCAAGCTCCAAGCCGCTCGCGATATTCGCCGCCTCACCAAAACCTCCCAGCGTTGTCGCCGACAGCTCTCTCAAGCTGTCGGTCCCCTCGTTTCCATGCTCCGACTCGACTCCTCCGAGTCTCACGAGCCTGCTCTTCTCGCTTTGCTCAACCTTGCCGTCAAAGACGAAAAGAACAAAATCAGCATTGTGGAAGCTGGACTTCTGGAGCTTACCGTTCAGGGAACACCCAAGTCTCAGTTAAAAGCCCGGAACCTTCTGCAGCTACTGAGAGAAACTCCATATCCGAGATCTGAGATTCAACCAGACACTCTTGAGAACATAGTTTGCAATATCATATCCCAGATTGATAGCGATGATCAGTCTGGTAAAGCGAAGAAGATGCTAGCTGAGATGGTCCAAGTCAGCATGGAACAGAGTCTGAGACATTTACAGCAAAGGGCTCTTGTGTTCACCCCCACAAGTGATCGGCCCACTATTACTAACTGTGCTTCTGAAGTGTCTTTAAAATGA 651 0.5192 MDISSPSSSPSSYGALSPDSNLDADTPRTPLAVRRALQLLQSDVPDLKLQAARDIRRLTKTSQRCRRQLSQAVGPLVSMLRLDSSESHEPALLALLNLAVKDEKNKISIVEAGLLELTVQGTPKSQLKARNLLQLLRETPYPRSEIQPDTLENIVCNIISQIDSDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVFTPTSDRPTITNCASEVSLK 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1272 216 MobiDBLite consensus disorder prediction 1 24 - -
Lele28g1272 216 MobiDBLite consensus disorder prediction 1 27 - -
Lele28g1272 216 Gene3D - 31 204 IPR011989 -
Lele28g1272 216 SUPERFAMILY ARM repeat 35 162 IPR016024 -
Lele28g1272 216 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 32 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1272 Lele-ChrLele28 8487867 8490878 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1281 26 8462443 8463664 Lele28g1272 28 8487867 8490878 CCT
Lele27g0815 27 16196886 16198146 Lele28g1272 28 8487867 8490878 CCT
Lele28g1273 28 8502357 8503565 Lele28g1272 28 8487867 8490878 CCT
Lele25g1267 25 8538303 8541322 Lele28g1272 28 8487867 8490878 CCT
Lele28g1272 28 8487867 8490878 Lele28g1272 28 8487867 8490878 ECH
Lele25g1267 25 8538303 8541322 Lele28g1272 28 8487867 8490878 hybridization
Lele26g1280 26 8443352 8446329 Lele28g1272 28 8487867 8490878 hybridization