Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1269 ATGAGAAAGCCTTGCTGCGACAAAGAAGACACCAACAAAGGAGCTTGGTCCAAACAAGAAGACCAAAAGCTCATCGATTACATCCAAACTCATGGCGAAGGTTGCTGGCGTTCCCTTCCCAAAGCTGCAGGGCTGCATCGTTGTGGAAAGAGTTGCAGGTTGAGATGGATAAATTATTTGAAGCCTGATATCAAACGTGGAAACTTTGCTCAAGACGAAGAAGACCTCATCATCAAGCTCCATGCCCTCCTCGGCAACCGGTGGTCCCTGATAGCTGGAAGGTTACCTGGAAGAACAGACAATGAGATCAAGAACTATTGGAATTCTCACATCCGCAGGAAGCTGAAGAAGATGGGGATAGATCCAGATAACCATAAGCTTATTCATCTTCATCACCAAAGCTTTCCTCTTCTTCATGCTGCTGCTGCAACTTCCTCTGACTCCTTCATCAAAGAAAACCCTAATAATAATTCCAATAACTTGAATCTTGACCTTACTATTGCTTTTCCTTCTCGCACAGTACCAAACCCAAACTTATCATCTGCTGAGTCATCCCACAATAATAATAATACTAAGGACATGGAACAAAGCCAATCAGCGCCAACCCTTCCTCTATTTAACTAG 624 0.4375 MRKPCCDKEDTNKGAWSKQEDQKLIDYIQTHGEGCWRSLPKAAGLHRCGKSCRLRWINYLKPDIKRGNFAQDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEIKNYWNSHIRRKLKKMGIDPDNHKLIHLHHQSFPLLHAAAATSSDSFIKENPNNNSNNLNLDLTIAFPSRTVPNPNLSSAESSHNNNNTKDMEQSQSAPTLPLFN 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1269 207 CDD SANT 15 60 IPR001005 -
Lele28g1269 207 Gene3D - 13 65 - -
Lele28g1269 207 CDD SANT 68 111 IPR001005 -
Lele28g1269 207 FunFam MYB-related transcription factor 12 65 - -
Lele28g1269 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Lele28g1269 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Lele28g1269 207 MobiDBLite consensus disorder prediction 174 207 - -
Lele28g1269 207 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 191 - -
Lele28g1269 207 SMART sant 12 62 IPR001005 -
Lele28g1269 207 SMART sant 65 113 IPR001005 -
Lele28g1269 207 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Lele28g1269 207 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Lele28g1269 207 FunFam MYB transcription factor 67 128 - -
Lele28g1269 207 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Lele28g1269 207 Gene3D - 68 133 - -
Lele28g1269 207 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Lele28g1269 207 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1269 Lele-ChrLele28 8464540 8465903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1269 2 168 MYB Transcription Factor Family AT4G38620 62.874 9.12e-75 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele28g1269 Myb_DNA-binding 1.9e-14 CL0123