Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1264 ATGGAATTCATGCTTCTATTTTCAGGCATGTTCCTTGTGGATGTCATTTGGGGTGTATGTAACTGGGGCGCTCTTCCAGACTTCTGCCTTTGTCTCCTTGCTCATTACTCATGGCTACTTGAACGCCGTACAACTGCTGCACTTGGATGTGCCTTTTACTTAACTCTACTTGATACAAAGCTTGTGTACCATCTTCATGGTAAGGAAGTTCCAGGGTGCAATGCAGATAGTAGCTATGGCAGAAACTGTGCTGGTGGTGGCTTCACTGAAAATAGCGAGAAGCCATTCTGGGCTCTGAGGTTTGTAGTTATGGGTTGCTGCTTTAGTGCGAGAATCAAAGCTGAAAGCCCTCCACAAAAGGCTAGGAACTCAAGCCATGATAGCAAAGAAGAGGATGGTTTAATGGGTGGAAGTAGCAAGTTCTCCACTTCCTCGGTGCCTCCAACGCCTCGAACGGAGGGTGAGATCTTGCAGTCCTCCAATTTGAAAAAATTCACATATAATGAGCTAAGAACAGCTACAAGGAACTTTCGCCCTGACAGTATGGTAGGCGAAGGCGGGTTTGGTGGCGTATTTAAGGGGTGGCTTGATGAGCAGACACTTGCACCGGCTAAACCGAGCACTGGGCTAGTCATTGCTGTCAAGAAGCTTAACCAAGAAGGATTCCAGGGACACAATGAATGGTTGACAGAGATCAATTTTCTGGGACAGCTGCATCATCCTAACCTTGTGAAATTGATTGGCTACTGCTTAGAGGATGAACATCGGCTTTTGGTATACGAGTTTTTGACCAAAGGCAGCTTGGATAATCATTTATTTCGAAGGACATCTCATGTTGAACCACTTTCTTGGAGCAACCGTATGAAAATTGCCCTTGATGCTGCAAAGGGTCTTGCATTTCTTCATAGCGATGGAGTAAAAGTGATATATCGAGACCTAAAAGCTTCTAATATCTTGCTTGATTCAAACTTCAATGCAAAGCTGTCTGATTTCGGATTGGCAAAGGACGGGCCATCGGATGATAAGAGCCATGTCTCTACAAGGGTCATGGGCACATATGGCTATGCTGCTCCGGAGTATATGGCCACAGGTCACCTGACAAAGAAGAGTGATGTATACACTTTCGGGGTTGTCCTGCTTGAAATTATGTCAGGCAAGCGGGCATTGGACAGAAACAGGACAGCCAGGGAACAGAATTTAGTCGAATGGGCCAAGCCATACCTTTCGAGCAAGCGCCGGATTTTCCAAGTCATGGATGCTCGTATCGAAGGCCAGTACCTGGTACGCGAAGCTATGAAAGTAGCTAAAATCGCGATCCAATGCCTGTCTGTAGAGCCCCGGTTCAGACCAACCATGGCCGACGTGGTAAGAGCATTGGAACAACTACTGGATACCAGTGATGCAGGTAGCTCAACAGGTAGTAGCAGTAGTAATGTTCCTAAACAGCATAAAAGAAGTACGAATGAATCTTTGAATGGGGCTGCTACTTCTGAGCGCAGATCCTCTGCTTCTCGTTCCACGTAA 1524 0.4639 MEFMLLFSGMFLVDVIWGVCNWGALPDFCLCLLAHYSWLLERRTTAALGCAFYLTLLDTKLVYHLHGKEVPGCNADSSYGRNCAGGGFTENSEKPFWALRFVVMGCCFSARIKAESPPQKARNSSHDSKEEDGLMGGSSKFSTSSVPPTPRTEGEILQSSNLKKFTYNELRTATRNFRPDSMVGEGGFGGVFKGWLDEQTLAPAKPSTGLVIAVKKLNQEGFQGHNEWLTEINFLGQLHHPNLVKLIGYCLEDEHRLLVYEFLTKGSLDNHLFRRTSHVEPLSWSNRMKIALDAAKGLAFLHSDGVKVIYRDLKASNILLDSNFNAKLSDFGLAKDGPSDDKSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYTFGVVLLEIMSGKRALDRNRTAREQNLVEWAKPYLSSKRRIFQVMDARIEGQYLVREAMKVAKIAIQCLSVEPRFRPTMADVVRALEQLLDTSDAGSSTGSSSSNVPKQHKRSTNESLNGAATSERRSSASRST 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1264 507 MobiDBLite consensus disorder prediction 466 507 - -
Lele28g1264 507 Pfam Protein tyrosine and serine/threonine kinase 181 459 IPR001245 GO:0004672|GO:0006468
Lele28g1264 507 ProSitePatterns Protein kinases ATP-binding region signature. 183 216 IPR017441 GO:0005524
Lele28g1264 507 Gene3D Phosphorylase Kinase; domain 1 152 262 - -
Lele28g1264 507 SMART serkin_6 177 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1264 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Lele28g1264 507 Gene3D Transferase(Phosphotransferase) domain 1 263 485 - -
Lele28g1264 507 MobiDBLite consensus disorder prediction 120 134 - -
Lele28g1264 507 CDD STKc_IRAK 207 462 - -
Lele28g1264 507 MobiDBLite consensus disorder prediction 118 154 - -
Lele28g1264 507 SUPERFAMILY Protein kinase-like (PK-like) 149 459 IPR011009 -
Lele28g1264 507 FunFam Serine/threonine-protein kinase BIK1 144 262 - -
Lele28g1264 507 FunFam Serine/threonine-protein kinase PBS1 263 477 - -
Lele28g1264 507 MobiDBLite consensus disorder prediction 137 154 - -
Lele28g1264 507 ProSiteProfiles Protein kinase domain profile. 177 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1264 507 PANTHER OS01G0588500 PROTEIN-RELATED 131 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1264 Lele-ChrLele28 8423399 8428555 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1264 107 499 Glycoside Hydrolase AT3G07070 43.812 3.33e-106 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele28g1264 PK_Tyr_Ser-Thr 1.9e-48 CL0016