Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1260 ATGGCAATCGGACTAATGGAGGTGCTTGTTGTCAAAGCTAAGGGCCTTCCTCTCTCTGATCTCTTTGCTCGTATCGATCCCTTCGTTCTGATTCAGTACAAAGGCCAAGAGCGCCAGACTGGTGTGGTTCATGAGGGAGGTAGCAATCCAGTGTGGAACGAGAAATTTGTGTTCAGAGCAGAATATCCAGGATCAGGCGACCAATTCAAGCTCATCTTTAAAATCAAGGACAAGGACTTTTTCTCTTCTGATGACTTCCTTGGCCAAGCCGAAATATATGTGGAGGATTTGTTGGCTGTAGGAGCAGAGAATGGAAGAGCTGAGCTTCATCCTCGAAAGTATAGAATAGTTGGTGCAGATCAATCTTACTGTGGAGAGATTGAAGTTGGTATCACTTTCACCCTTAAGGAAGAAGACGAATCCCTTGACAAAGACATTGGAGGGTGGAAGGAAAGCGACTACTAG 465 0.4538 MAIGLMEVLVVKAKGLPLSDLFARIDPFVLIQYKGQERQTGVVHEGGSNPVWNEKFVFRAEYPGSGDQFKLIFKIKDKDFFSSDDFLGQAEIYVEDLLAVGAENGRAELHPRKYRIVGADQSYCGEIEVGITFTLKEEDESLDKDIGGWKESDY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1260 154 Gene3D C2 domain 2 151 IPR035892 -
Lele28g1260 154 PANTHER C2 DOMAIN-CONTAINING 3 138 - -
Lele28g1260 154 Pfam C2 domain 6 99 IPR000008 -
Lele28g1260 154 SMART C2_3c 5 106 IPR000008 -
Lele28g1260 154 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 134 IPR035892 -
Lele28g1260 154 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1260 Lele-ChrLele28 8396563 8398444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1260 3 109 C2H2 Transcription Factor Family AT4G21160 32.710 2.37e-11 58.5