Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1256 ATGGTGTGCAAGAAGAGGCTAGAATATGGATTCAATGGCTTTCAGGTCCCCTTTATTCCTAGAGCTCCTAGATCTGTAAGAAGGAGGGTTCTTTCCAAGAAAGAAGAGGACGGTCATGTTTGTGCCATTGAAGTACTGGCATCTTTAGCTGGCAAGTTGTTGCAGGAGAGTGAAAGTTCAGCTTCTAGCAATGCATCAGAAGGAAATCACCAGCCAGCCTCCGGCCAAGGCGCTGTTGAGCAGGAAAGTCAAGGTGAAGCCAAACCGTTAGTAGCAGAAGGTGTTCATCATGGAAGTTGTGCAGAGAGTGCCTTTATGACTGAGTTATTGTCACGAAATTCTAGCCTGAAGTATCTTGGGCAAGCTAAAACTGATGCTGTACCAGAATGCACTTCCTTTACTAATCCTGCTGACTGCTTCAAGAAAATTGAACCTAACATTAACCCTGAAATATGCAAATGGGAGGATCAAGTTGAACATTATTCTAGTAGGTTAGCAGCACCCCGAAATTTTAGGGGGTCTTATAATAATAGTAATATAAACAATGGCTTTAAGAGGGAACAAGAAGCTGGGAGTTCAGGAATTGAGGGACCAAGTCTTGCTGATAAATGCCGTTTGAAGGATCCTTTGGAATTTCGAGTTAAATCTCACGCAATAAGTAACTCAGTTAGTAAAATTAAATATCCATCCTCTAGAGGAACTTTTTCAAATGGTTCCTTTTCTAATCATGGCAATAATAGTAAGGTAGGTTTTAGAGATGATGACGAAAACTTTATTAGGTGCAACAAAATTTGCACCAAATCAAAGGCTTTTAAGCCTCTGCATCGTATTGCACACCGCAGAATCAGGAAGCTCGTGACTTCCAAATACTGGAAGGTTGCTCCGAAGTTGAAGGATTGCGAGCTTTCCAGATCTGATGCTGAAGCAAAGCCTCTTTTTCAGAAGAGGAAGGCTTGTCACAGTTTTGAAAGAGGTCATTATGATACTCTTTCCAAGAGGAGGAAATTCTCTAATCGGTGTTCAGGACTGACACTTAATGGAGGATTCAGCAGTGAGAGTGTATCTAATTCACTTGAGAAGGGAATGGATGGAAACAACCCTAGCTCATCTTCAAAACAGCTCGAGTCGAAGGATTCTCATGTGAAGTTTAGCATTAAGTCTTTCAAGATACCAGAGCTTTATATTGAGGTTCCTGAAACTGCTACTGTCGGTTCTCTTAAGAGGACGGTCATGGAGGCTGTGATGGCTATACTTGGGGATGGAGTGCATGTTGGTGTTGTTCTTCAGGGGAAGAAAGTTAGAGATGACAACAGAACTCTTCAGCAGACTGGTTTATCTTGTGAAGAAAATATTGATACCCTTGGTTTCACGTTGGAGCCGAGTTCCTTACAAGGCTCTCCTTCTGTATGCGTTGGTGATCCTTCTTATCACGAACCGTCCCATTCAATCAGGTCCCCTAGAACTCCTGTCTTAGATTCGGGGATTACTGATGTCTTACAAGACTCTCCCTTGCTGACTACTCCGATTGACGCTATTGAAAGTAACCATGAATTAATTTCTTCTCCCACTGACACAATGACTGACAAAGTAGAGCCAGATTCCAAATCCTTAGTAGTTGTTCCTGATAGGAGCACAGAACCCTTGGCTATAGTTCCAGCGACTCAGAAAGCTAAGCGCTCTGAGCTTGTACAGCGTCGAACCAGGAGACCCTTCTCAGTGTCTGAGGTAGAAGCACTTGTTCAGGCTGTTGAAGAACTTGGAACCGGAAGGTGGCGTGATGTTAAGCTGCTTGCTTTTGAAAATGCAGACTATAGGACTTATGTTGACTTGAAGGACAAATGGAAAACGTTAGTACACACAGCAAGAATATCTCCCCAACAAAGAAGAGGAGAGCCAGTACCTCAGGAGCTGTTGGACAGAGTGTTGGCTGCCCATGCTTTCTGGTCACAGCATCAAGGCAAGCAGCAACAACATGGGAAGCAGCAGCAACAACCTCCGGCAACTCCCAACAAGGTCAAAGAATCCTCATCAGCTCCTCAATGTCTCAGTCTTGTTGCTGGTGAAGCTGGTGGTGGTGTCATCGAACCCATTGGAACAACGTAA 2103 0.4379 MVCKKRLEYGFNGFQVPFIPRAPRSVRRRVLSKKEEDGHVCAIEVLASLAGKLLQESESSASSNASEGNHQPASGQGAVEQESQGEAKPLVAEGVHHGSCAESAFMTELLSRNSSLKYLGQAKTDAVPECTSFTNPADCFKKIEPNINPEICKWEDQVEHYSSRLAAPRNFRGSYNNSNINNGFKREQEAGSSGIEGPSLADKCRLKDPLEFRVKSHAISNSVSKIKYPSSRGTFSNGSFSNHGNNSKVGFRDDDENFIRCNKICTKSKAFKPLHRIAHRRIRKLVTSKYWKVAPKLKDCELSRSDAEAKPLFQKRKACHSFERGHYDTLSKRRKFSNRCSGLTLNGGFSSESVSNSLEKGMDGNNPSSSSKQLESKDSHVKFSIKSFKIPELYIEVPETATVGSLKRTVMEAVMAILGDGVHVGVVLQGKKVRDDNRTLQQTGLSCEENIDTLGFTLEPSSLQGSPSVCVGDPSYHEPSHSIRSPRTPVLDSGITDVLQDSPLLTTPIDAIESNHELISSPTDTMTDKVEPDSKSLVVVPDRSTEPLAIVPATQKAKRSELVQRRTRRPFSVSEVEALVQAVEELGTGRWRDVKLLAFENADYRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAFWSQHQGKQQQHGKQQQQPPATPNKVKESSSAPQCLSLVAGEAGGGVIEPIGTT 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1256 700 MobiDBLite consensus disorder prediction 649 681 - -
Lele28g1256 700 MobiDBLite consensus disorder prediction 57 86 - -
Lele28g1256 700 Gene3D - 556 660 - -
Lele28g1256 700 SMART sant 567 620 IPR001005 -
Lele28g1256 700 SUPERFAMILY Homeodomain-like 569 650 IPR009057 -
Lele28g1256 700 CDD SANT_TRF 569 619 - -
Lele28g1256 700 MobiDBLite consensus disorder prediction 57 81 - -
Lele28g1256 700 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 564 622 IPR017930 -
Lele28g1256 700 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 661 IPR031105 -
Lele28g1256 700 MobiDBLite consensus disorder prediction 354 374 - -
Lele28g1256 700 MobiDBLite consensus disorder prediction 354 376 - -
Lele28g1256 700 ProSiteProfiles Myb-like domain profile. 563 618 IPR001005 -
Lele28g1256 700 SUPERFAMILY Ubiquitin-like 376 459 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1256 Lele-ChrLele28 8351355 8354864 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0831 27 16347726 16351111 Lele28g1256 28 8351355 8354864 ECH
Lele41g0048 41 350904 354512 Lele28g1256 28 8351355 8354864 ECH
Lele42g0048 42 375503 378796 Lele28g1256 28 8351355 8354864 ECH
Lele43g1311 43 21239927 21244822 Lele28g1256 28 8351355 8354864 ECH
Lele44g1303 44 21293703 21300749 Lele28g1256 28 8351355 8354864 ECH
Lele28g1256 28 8351355 8354864 Lele28g1256 28 8351355 8354864 ECH
Lele25g1252 25 8364994 8368405 Lele28g1256 28 8351355 8354864 hybridization
Lele26g1264 26 8317193 8320701 Lele28g1256 28 8351355 8354864 hybridization