Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1253 ATGATTGGTCTTGTCAGTTTCCAAACCATGGGCGATGCTATTAATTTGACTGGTGATGGAGGTGTCGTAAAGACCATTGTGAAAAGAAGCAAGGTTGATGCTGTGGGTCCTACTGAAGATTTCCCCCTTGTTGATGTTCATTATGAAGGAACACTTGCTGATACTGGTGAAGTATTTGATACCACACATGAGGATAACACTGTATTCACTTTTGAGGTTGGAAAGGGCAGTGTTATCAAGGCTTGGGACATTGCAGTGAAGACCATGAAGGTTGGAGAAATTGCAAAAATTACTTGCAAGCCGGAATATGCATATGGCAGTGCAGGATCTCCACCAGATATCCCCCCAGATGCGACACTTGTTTTTGAAGTTGAGTTAGTTGCATGTAAGCCCCGGAAGGGTTCCAGTCTGGGAAGTGTTTCAGACGAGAGGGCCAGGCTAGAAGAGCTGAAGAAGCAGAGAGAGATCGCAGCTGCGGCCAAAGAGGAGGAGAAACGGAAGAGAGAGGAAGCAAAAGCTGCTGCTGCTGCTCGTGTGCAAGCCAAGTTAGAGGCCAAGAAAGGTCAAGGAAAGGGTAAATCGAAAGCAAAGTAG 594 0.4646 MIGLVSFQTMGDAINLTGDGGVVKTIVKRSKVDAVGPTEDFPLVDVHYEGTLADTGEVFDTTHEDNTVFTFEVGKGSVIKAWDIAVKTMKVGEIAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVACKPRKGSSLGSVSDERARLEELKKQREIAAAAKEEEKRKREEAKAAAAARVQAKLEAKKGQGKGKSKAK 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1253 197 MobiDBLite consensus disorder prediction 158 175 - -
Lele28g1253 197 FunFam Peptidylprolyl isomerase 10 129 - -
Lele28g1253 197 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 41 130 IPR001179 GO:0003755
Lele28g1253 197 Coils Coil 140 179 - -
Lele28g1253 197 Gene3D - 8 129 IPR046357 GO:0003755
Lele28g1253 197 MobiDBLite consensus disorder prediction 158 197 - -
Lele28g1253 197 SUPERFAMILY FKBP-like 17 133 - -
Lele28g1253 197 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 43 127 IPR001179 GO:0003755
Lele28g1253 197 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 18 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1253 Lele-ChrLele28 8284498 8287449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1253 2 164 Calmodulin-binding Proteins AT5G48570 32.738 5.55e-13 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g1253 28 8284498 8287449 Lele28g1253 28 8284498 8287449 ECH
Lele25g1247 25 8301775 8304358 Lele28g1253 28 8284498 8287449 hybridization
Lele26g1261 26 8254703 8257257 Lele28g1253 28 8284498 8287449 hybridization