Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1243 ATGGGAGGATTAGAAAACTACAAGCCGTTAGCGGCTATGTTGGTGATTCAGATCACTTTCGCAGCTCTTTCTCTCAGCACCAGAGTCGCCTTATTACAGGGCTCGAGTCCTCGAGTCTTTGTGCTTTACCGGCAAGCCATAGCTACTTCTGTCATTGCACCCATTGCCTATTTCTCAAGGAGAAAATCTGGGTCGTGTTGGTTGAGTTTGAGGAGTTTCACCTTCTTGTTCTTGTCCTCGCTTATAGGCGTTACTATAAACCAGAATGTATATTTCGAAGGTCTACATCTGGCATCCTCATCAATTGCAAGTGCTATAGGGAATCTTATTCCAGCCGTCACATTCATAATTGCAGTTTTTGCGGGAATGGAGAGAGTGAATTGTGGAAGCTTGAGAAGTGTAGCAAAGATAGGAGGGACGTTGATGTGCGTAAGCGGAGCTGTGTCCATGGCATTCCTAAGAGGTCCAAAGTTATTAAACTCAGTAGTAATGGATTCAGGAGTAGGTGATGATCAGAAAAACTGGTTGCTTGGTTGTCTCTTTCTCTTTGCAAGCTGCTGTTTCTGGTCCATTTGGCTGATATTGCAGGTTCCGGTGTCGGCAAGCCACCCAGATCACCTATCGTCGTCAGCTTGGATGTGTTTGATGGCAACACTACAATCAGCAGCAGTCACTCTGGTCTTGGAACGAGGCCCTCAAACATGGAAGATCCATTCATTGCTTGAACTGGCTTGCTGTGTATATGCAGGTGTGATAGGATCAACAGCATCGTTCTTTATTCAAGCATGGTGCATATCACAGAGAGGTCCTCTCTTTTGTGCAATGTTCAATCCTCTGTGCACGGTCGTTGTCACCCTATTCGCTGCCTTATTTCTTCACGAAGACATGTACATTGGAAGCTTGATAGGAGGTGTGGGAGTGATAATGGGGTTGTATGTTGTGCTGTGGGGTAAGGCTGAAGAAGAAGAATATGGTGAGACAACAAATGTGGAGGAAAGTGATGATGATACGGTCATTATATCGAAAGATGTTGCATCTTTTGACAAAGAAGCATCATGTTGTAAAATTGATCTGAAGGAGCCACTCCTCTCTGCTAAACTTCTTCCACCTCATTATTATTCTTAA 1125 0.4444 MGGLENYKPLAAMLVIQITFAALSLSTRVALLQGSSPRVFVLYRQAIATSVIAPIAYFSRRKSGSCWLSLRSFTFLFLSSLIGVTINQNVYFEGLHLASSSIASAIGNLIPAVTFIIAVFAGMERVNCGSLRSVAKIGGTLMCVSGAVSMAFLRGPKLLNSVVMDSGVGDDQKNWLLGCLFLFASCCFWSIWLILQVPVSASHPDHLSSSAWMCLMATLQSAAVTLVLERGPQTWKIHSLLELACCVYAGVIGSTASFFIQAWCISQRGPLFCAMFNPLCTVVVTLFAALFLHEDMYIGSLIGGVGVIMGLYVVLWGKAEEEEYGETTNVEESDDDTVIISKDVASFDKEASCCKIDLKEPLLSAKLLPPHYYS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1243 374 Pfam EamA-like transporter family 177 315 IPR000620 GO:0016020
Lele28g1243 374 Pfam EamA-like transporter family 13 129 IPR000620 GO:0016020
Lele28g1243 374 PANTHER WAT1-RELATED PROTEIN 8 328 IPR030184 GO:0016020|GO:0022857
Lele28g1243 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 212 319 - -
Lele28g1243 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1243 Lele-ChrLele28 8216685 8219039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1243 1 364 Nodulin-like Gene Family AT4G30420 54.032 2.73e-141 405