Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1241 ATGGTTAGGACAGCGACAGGACTCGGCTCTTCATGTGGAGCATGCAAGTTCCTCCGCAGAAAGTGTACTGCTGATTGCATATTTGCTCCTTACTTCTCCTATGAGCAGGCTGCTACCCATTTTGCAGCAGTGCATAAGGTTTTTGGCGCTAGTAACGTCTCTCGGCTACTGCTACACCTACCCATGCAGAGTAGAAGTGATGCAGCCATCACTGTGTCTTACGAGGCACTCGCTCGGATGCATGATCCTGTATATGGTTGTGTTGCTCAAATCTTCGTCCTGCAGCAACAGGTTGCAAGCTTACAAGAGGAAATAGATAAACTTGGTAATATGATGGCCACCTCTCCTGTTGGTGCTTCCATTTCTGGTGGCAGTTCTCAAGCCTCAACAAGCAGAAACACAGATGGGATAGATTTTTCTTGGCAGCAAGATGCAATAAACACACAACTTTATCATACTCCACTATCTACTCTGCTTCCTCACCAAGCAAGTACTGCAGCCTACCAAGGCATGGAAGGACAGGTGGATTTGGATTTTCCAGATGCTCTTCAATTCGAAGACCACGTATTTGATGAGTCCGACCTCAATTCATTAGAGAAGCTCCTGTCAGGAATTGACCAACAGGTTTTCATCAATCATCCTTGA 645 0.462 MVRTATGLGSSCGACKFLRRKCTADCIFAPYFSYEQAATHFAAVHKVFGASNVSRLLLHLPMQSRSDAAITVSYEALARMHDPVYGCVAQIFVLQQQVASLQEEIDKLGNMMATSPVGASISGGSSQASTSRNTDGIDFSWQQDAINTQLYHTPLSTLLPHQASTAAYQGMEGQVDLDFPDALQFEDHVFDESDLNSLEKLLSGIDQQVFINHP 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1241 214 PANTHER LOB DOMAIN CONTAINING PROTEIN 7 145 - -
Lele28g1241 214 Coils Coil 91 111 - -
Lele28g1241 214 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Lele28g1241 214 ProSiteProfiles LOB domain profile. 10 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1241 Lele-ChrLele28 8200932 8201652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1241 9 114 AS2 family AT5G06080 74.528 1.14e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele28g1241 LOB 6e-35 No_clan