Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1239 ATGAGACCTAATAAAGATCCCTTGTTGTCTTCTCCATCGCTTCAGCTGAGAAACCCAGAAAACAACACCACTCCAACCAATAGCAGCAATAGCAACAATAACGCCAACACAAACACAAACTCGCAGAGCCAGAACATCGTCGACGACGACGAGAGCCGACACAAAAGTAGCGGCGAAGCAGATGATCAAAACCCAGGTAGCCATGACGGCGCGGCAGAGCCGGGAAGCAGCAGCAGCCGACGTCCCCGAGGCCGCCCATCCGGGTCAAAGAACAAGCCAAAGGCACCGGTGGTTGTGACAAAGGAGAGTCCTAATGCCCTCCGGAGCCACGTGTTGGAAATCTCCAGCGGCAGCGATGTGGCCGAGAGCCTCTCCACCTTCGCTAACCGGAGACACCGCGGGGTGTCAGTGCTGAGCGGAAGTGGTATTGTAACCAATGTCACTCTCCGGCATCCGGCGATTCCAGGTGGCGTGATCACACTAAATGGACGGTTCGAGATCCTGTCACTATCCGGGGTGTTTTTGCCGGCCCCTTGGGCGGCTGGAGCCACGGGGCTAACCGTATATCTCGCCGGCGGACAAGGGCAAGTTGTTGGTGGAAATGTGGTGGGTTCATTGGTGGCATCAGGGCCCGTATTGGTGATTGCAGCGACATTCGCTAATGCAACATATGAGAGATTGCCGCTTGAAGATGAACCATCTGGGGAAGATAATGTAGAACTGCAAGCACAGCAACAATCTGGTGGGATCTCTTCAACATCTCAAGCTTTGAATGAACAAGTTTCCATGCGAATGTTCAATAACATGCCACCAAATTTGCTGCAACCAAGTAATGATCAAATGCCACATGATGTGTTCTGGGCGCCTCCTGCTCGCCAACCTCCTTACTGA 891 0.5331 MRPNKDPLLSSPSLQLRNPENNTTPTNSSNSNNNANTNTNSQSQNIVDDDESRHKSSGEADDQNPGSHDGAAEPGSSSSRRPRGRPSGSKNKPKAPVVVTKESPNALRSHVLEISSGSDVAESLSTFANRRHRGVSVLSGSGIVTNVTLRHPAIPGGVITLNGRFEILSLSGVFLPAPWAAGATGLTVYLAGGQGQVVGGNVVGSLVASGPVLVIAATFANATYERLPLEDEPSGEDNVELQAQQQSGGISSTSQALNEQVSMRMFNNMPPNLLQPSNDQMPHDVFWAPPARQPPY 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1239 296 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 288 IPR014476 GO:0003680
Lele28g1239 296 MobiDBLite consensus disorder prediction 1 99 - -
Lele28g1239 296 Gene3D - 107 244 - -
Lele28g1239 296 MobiDBLite consensus disorder prediction 47 62 - -
Lele28g1239 296 ProSiteProfiles PPC domain profile profile. 104 242 IPR005175 -
Lele28g1239 296 MobiDBLite consensus disorder prediction 8 46 - -
Lele28g1239 296 PIRSF ESCAROLA 17 296 IPR014476 GO:0003680
Lele28g1239 296 CDD DUF296 108 191 IPR005175 -
Lele28g1239 296 Pfam Plants and Prokaryotes Conserved (PCC) domain 108 220 IPR005175 -
Lele28g1239 296 MobiDBLite consensus disorder prediction 70 84 - -
Lele28g1239 296 MobiDBLite consensus disorder prediction 229 254 - -
Lele28g1239 296 MobiDBLite consensus disorder prediction 238 254 - -
Lele28g1239 296 FunFam AT-hook motif nuclear-localized protein 107 234 - -
Lele28g1239 296 SUPERFAMILY AF0104/ALDC/Ptd012-like 104 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1239 Lele-ChrLele28 8187576 8188466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1239 10 295 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 51.155 1.10e-67 211