Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1233 ATGTTGAAGACGTCATCATGGGAAGAGCGGGCTTTTGCAGAAGACGCAGCAAGGATACTTGGTGGCTACGTATGGCCTCCAAGATCTTACTCTTGCAGTTTCTGCAAAAGAGAGTTCAGGTCTGCACAAGCTCTTGGGGGTCACATGAACGTTCACAGGAGGGATAGAGCCAGGCTCAAACAGAGCCATCAGCAACAAACTGTAATTCCTCATCATAATGATTCTAAGAGATCTTCTGATTCTTCAGAGGTCAATGGAAGGGAAGAAGAAGATTTTGCAGGCTTCATCAGTCATGGGACTAATAATAATAATAATTATTATGTTGAAACAGACTTGGCCTTGGGATTACTACCTTCATCATCATCAGCTGAAGAAGCTTCTTTAAGTTGTAAGAGAACTAAGATTTCTTCCAATATTTCTTCAGTCTTCATCAAGCCATTCTCAAACAATCACACAGCAGCAGCAGCAAGCCTGGTTTTCCAATCTGCAGAAATGGTGATCGGAGTTCATAAGCCTAAAATGGAAGACTTGGATCTTGAACTCAGGCTGGGGAAATCACAGAAATTTAAGTGA 573 0.4206 MLKTSSWEERAFAEDAARILGGYVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKQSHQQQTVIPHHNDSKRSSDSSEVNGREEEDFAGFISHGTNNNNNYYVETDLALGLLPSSSSAEEASLSCKRTKISSNISSVFIKPFSNNHTAAAASLVFQSAEMVIGVHKPKMEDLDLELRLGKSQKFK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1233 190 ProSiteProfiles Zinc finger C2H2 type domain profile. 30 57 IPR013087 -
Lele28g1233 190 MobiDBLite consensus disorder prediction 55 87 - -
Lele28g1233 190 PANTHER OS07G0101800 PROTEIN 4 186 - -
Lele28g1233 190 Pfam C2H2-type zinc finger 30 54 - -
Lele28g1233 190 SUPERFAMILY beta-beta-alpha zinc fingers 27 57 IPR036236 -
Lele28g1233 190 ProSitePatterns Zinc finger C2H2 type domain signature. 32 52 IPR013087 -
Lele28g1233 190 Gene3D Classic Zinc Finger 27 91 - -
Lele28g1233 190 MobiDBLite consensus disorder prediction 73 87 - -
Lele28g1233 190 SMART c2h2final6 30 52 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1233 Lele-ChrLele28 8123199 8123771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1233 3 65 C2H2 Transcription Factor Family AT2G37740 76.190 1.62e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele28g1233 zf-C2H2_6 7.8e-07 CL0361