Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1231 ATGGCTGGGATTTGCTGTGGTGTTGTTGGAGAAGGTGAGACTCCGACTCCGATGGAGCCGGGACGATCTTCTCGGCGCCGGAGGTTGGATATAATGCCCTTGAAGCTTATGGCTGACATGGCTGTGCCGCAGCCTGATACCTGCAGCCTCAAGCGCCAAAAGCTGGATCTCTGTACTAATTCTCCGATTCAACCAATAGACTGTATGAACGCTGTTGAGAATTGTGAATCTAATGGTGTTAAGAAGGAAGAGGAACGAAACAAGGCGGAACAGAAAGTGGATGAAGTTCCGTCAACGGTTTCTTCGTTAAATTCAACTGGTACAAAAGAGTGTAATAATGAGGATATTCATGAGTGTCCGAAGTTTGGGGTTACATCGGTTTGTGGTAGAAGGAGGGATATGGAAGATGCGGTTTCAGTTCGTCCGTGGTTCTGCCAAGAACAGGGTCAAAATCGGGAGGAGTTTCACTACTTCGGTGTGTTCGACGGCCATGGTTGCTCTCATGTAGCGACGATCTGTAAGGATAGGTTGCATGAGATTGTAAAGAAAGAGGTCGGCGGAGCACGAGAGGATTTGGAATGGAAGTCTATGATGGAGCAGAGTTTCGCTCAGATGGACGAGGAAGTCCAGAACTGGAGCCAGAGCAACCCGAGCTCCGCTTGCAGGTGCGAGCTTCAGACACCTCACTGCGATGCAGTCGGATCTACCGCGGTTGTTGCCGTCGTTACGCCAGACAAGATCATCGTCTCCAACTGTGGCGACTCCCGCGCAGTTCTCTGTCGAAACGGCGTTGCCGTACCCCTTTCATCCGATCACAAGCCCGACCGACCTGACGAGTTGCTCCGAGTTCAAGCCGCCGGAGGACGGGTCATTTATTGGGATGGTCCTAGGGTTCTTGGAGTTTTGGCGATGTCCAGAGCCATAGGCGACAATTATCTTAAACCATACGTTATATCGGAGCCGGAGGTGACGGTGACGGAGCGCACAGACGAGGACGAGTGTCTGATACTTGCGAGTGACGGCCTGTGGGACGTGGTGTCAAACGACACGGCATGCGGGGTGGTGCGGATGTGCTTGAAGGTGCAGAAACCACCGTCACCGCCGGGATCCCCGGGAAGCGACATGGCGTCGGTGTGCTCCGCCGCTGATGGGTCGGATAAGGCAAGCTCGGACGCATCCATTTTGCTGACTAAGCTAGCCTTGGCCAGGCACAGTACAGACAATGTGAGCGTGGTGGTGGTGGATTTGAGGAGAGAGAAACGACCAGAATATAACTCCGACGAGGGGAACAATAATTAA 1299 0.5289 MAGICCGVVGEGETPTPMEPGRSSRRRRLDIMPLKLMADMAVPQPDTCSLKRQKLDLCTNSPIQPIDCMNAVENCESNGVKKEEERNKAEQKVDEVPSTVSSLNSTGTKECNNEDIHECPKFGVTSVCGRRRDMEDAVSVRPWFCQEQGQNREEFHYFGVFDGHGCSHVATICKDRLHEIVKKEVGGAREDLEWKSMMEQSFAQMDEEVQNWSQSNPSSACRCELQTPHCDAVGSTAVVAVVTPDKIIVSNCGDSRAVLCRNGVAVPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTDEDECLILASDGLWDVVSNDTACGVVRMCLKVQKPPSPPGSPGSDMASVCSAADGSDKASSDASILLTKLALARHSTDNVSVVVVDLRREKRPEYNSDEGNNN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1231 432 SMART PP2C_4 109 414 IPR001932 -
Lele28g1231 432 MobiDBLite consensus disorder prediction 79 107 - -
Lele28g1231 432 SMART PP2C_SIG_2 135 416 IPR001932 -
Lele28g1231 432 FunFam Protein phosphatase 2C 37 116 423 - -
Lele28g1231 432 MobiDBLite consensus disorder prediction 363 382 - -
Lele28g1231 432 Gene3D - 116 425 IPR036457 -
Lele28g1231 432 Pfam Protein phosphatase 2C 122 408 IPR001932 -
Lele28g1231 432 PANTHER PROTEIN PHOSPHATASE 94 416 - -
Lele28g1231 432 Coils Coil 72 92 - -
Lele28g1231 432 CDD PP2Cc 121 416 IPR001932 -
Lele28g1231 432 ProSitePatterns PPM-type phosphatase domain signature. 157 165 IPR000222 GO:0043169
Lele28g1231 432 SUPERFAMILY PP2C-like 120 417 IPR036457 -
Lele28g1231 432 MobiDBLite consensus disorder prediction 79 93 - -
Lele28g1231 432 ProSiteProfiles PPM-type phosphatase domain profile. 121 416 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1231 Lele-ChrLele28 8105746 8107476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1231 120 421 PP2C-type Phosphatase Gene Family AT1G07430 64.174 1.01e-142 413