Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1205 ATGCAGACTTACATTGTCTACACCGGTAACAGCAACACTGATGAAGTTTCTGCCTCCTCACACTACACAAGCTTACTGCAAAAAGCCTCTGAGAGCTATGCTGTGCCCAAGTCAGTTCTCCATCGCTACAAACGGAGTTTCAATGGCTTTGTTGCGAAGCTAACGGAGAAGGAAGCTGAAACAATGTCCAGTCCAAGACCTGCATCGCTTGCAAATTTTGAACCTTGGGCTATTTCAGTGGCTGCTAGCACCATTGATAGAAAGTTGGTTACAAAGGTTGGATTAGGTGACAACAGAACATTTGAGGGAGTTTCAATAAATACATTTGACCTTAAGGAACAACAGTATCCTATAATTTATGGAGGAGATGCACCAAATACTCAAGCAGGTTTTGATGGATCTACATCCAGGTCTTGCAGTAGAGGTTCATTGGATCCAAATTTAGTCAAGGGTAAAATTGTTCTGTGTGAAGGCAGAAACAGAGCAGAAGGTGCCTTCGTGGCTGAAGCAGCTGGTGCACTTACACAAGGTCAGAATTCCAGAGACCATGGCCAGCCTTTCGCCTTGCCGGCTTCGTACATTGACCTGCAAGATGCTAGTAATATTTTTGTCTATATTAATTCCATTAGGAATTCAACTGCAACCATATTTAGAACTAGCGCAGAGAAGGATACATTGGCCCCTGTGGTGGTCTCTTTCTCCGCAAGAGGTCCTAACCATGTTTCTCCTGATATTCTCAAGCCTGATCTAGTGGCTCCAGGAGTGGACATTCTCGCTGGTTGGTCTCCAAGAGGCTCTATTTCTGGGGTTGAAGGCGACAACAGAAGTTTGCAGTTCAACATAATCTCAGGAACATCCATGTCTTGTCCACATGTTTCTGGGGCTGCAGCTTACGTTAAATCTTTCCATCCCAACTGGTCTCCTTCCGCTATCCAATCAGCTCTAATGACCACTGCTAGGCCACTGAGTCCCAGGATTAACCGAGATGCAGAGTTTGCATATGGAGCAGGTCAAATCGATCCTGTGAACGCAGTAAACCCTGGTTTAGTATACGATGCTAGTGAAGTTGACTTTGCAAGATTCTTATGTGGACAAGGGTACAGCACAAGGACATTACAGCTGATCACAGGGGATAATAGCAGCTGCTCTGTATCAGCTAAAGCTAGTGATCTGAACTACCCCTCCTTTGCTCTTCCAACACCTCCCTCCAACGTCACTGTGAGTGGCAGTTTTAAAAGAACTGTTACTCATGTTGGGTCAGAAAATTCCACATACAAAGCCACTGTGAATGCTCCTCCGGGTCTAGAAATCCAAGTGAACCCAAATGTTCTGTCTTTCAGTTCTTATGGTGAAAAGCAGAGCTTTGTTCTGAGTGTTGGAGGAAGCTTGGAAGCATCTTTAGTGTCAGCGTCTTTGATTTGGAGTGATGGTAAGATCCAAGTGAGGAGCCCTGTTGTTGTATTTAATTCACCTCAATAG 1479 0.4483 MQTYIVYTGNSNTDEVSASSHYTSLLQKASESYAVPKSVLHRYKRSFNGFVAKLTEKEAETMSSPRPASLANFEPWAISVAASTIDRKLVTKVGLGDNRTFEGVSINTFDLKEQQYPIIYGGDAPNTQAGFDGSTSRSCSRGSLDPNLVKGKIVLCEGRNRAEGAFVAEAAGALTQGQNSRDHGQPFALPASYIDLQDASNIFVYINSIRNSTATIFRTSAEKDTLAPVVVSFSARGPNHVSPDILKPDLVAPGVDILAGWSPRGSISGVEGDNRSLQFNIISGTSMSCPHVSGAAAYVKSFHPNWSPSAIQSALMTTARPLSPRINRDAEFAYGAGQIDPVNAVNPGLVYDASEVDFARFLCGQGYSTRTLQLITGDNSSCSVSAKASDLNYPSFALPTPPSNVTVSGSFKRTVTHVGSENSTYKATVNAPPGLEIQVNPNVLSFSSYGEKQSFVLSVGGSLEASLVSASLIWSDGKIQVRSPVVVFNSPQ 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1205 492 CDD PA_subtilisin_like 93 216 - -
Lele28g1205 492 Pfam Fibronectin type-III domain 390 487 IPR041469 -
Lele28g1205 492 Gene3D - 362 489 - -
Lele28g1205 492 Gene3D Peptidase S8/S53 domain 64 358 IPR036852 GO:0004252|GO:0006508
Lele28g1205 492 SUPERFAMILY Subtilisin-like 72 349 IPR036852 GO:0004252|GO:0006508
Lele28g1205 492 Gene3D - 86 223 - -
Lele28g1205 492 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 64 487 IPR045051 -
Lele28g1205 492 ProSitePatterns Serine proteases, subtilase family, serine active site. 284 294 IPR023828 -
Lele28g1205 492 ProSiteProfiles Serine proteases, subtilase domain profile. 1 345 - -
Lele28g1205 492 Pfam Peptidase inhibitor I9 3 63 IPR010259 -
Lele28g1205 492 Pfam Subtilase family 69 335 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1205 Lele-ChrLele28 7891056 7894118 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1205 2 58 Subtilisin-like Serine Gene Family AT5G59090 44.068 1.18e-06 49.3