Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1193 ATGGTGGTCACAGAGAAGTCTCATGTTGTTGTTGATATATTAGTAGATAATGGTGGTCGGCGTAGCAGCTCCGTCGGTGGCGGTGGCAATGGGGGGCATCCAGACGCTGCCGACAGTGTAGATAAGGTGCCAAAATCTTCCCACGAGGCATCTGGTGCCGAGATTGTGGGGGTGTCGGAAAAAGAGATGGGATCCTCTGCATCGGAGTGTTCGGTGGAGGTGGATTTGGAGAATGCGGTGACTGAAACTAAGGTACATTTGGGTGAAGTGATGAAGAGGGATTGTAGGATTTGCCATCTTAGTATGGATATGACAAATCATGAATCTGGGAGCATGGAGCTCGGATGTTCTTGCAAGGACGATTTGGTTGCTGCTCACAAGCAATGTGCTGAGGCTTGGTTCAAGATCAAGGGAAACAAAACCTGTGAAATCTGTGGATCAATTGCACGCAATGTAACTGGAGCGTTTGAAGTGGAAACAGTTGAACAGTGGAACGAGTCAAACGATGCCAGCATGGCAGCGCCCACTGGACCTGCGCCGTCACATGGTGAAAATAGAAGTTTCTGGAGAGGCCACAGATTCTTGAATTTCCTACTAGCTTGTATGGTATTTGCCTTTGTCATATCATGGCTTTTTCACTTCAATGTGCCCTCATGA 657 0.481 MVVTEKSHVVVDILVDNGGRRSSSVGGGGNGGHPDAADSVDKVPKSSHEASGAEIVGVSEKEMGSSASECSVEVDLENAVTETKVHLGEVMKRDCRICHLSMDMTNHESGSMELGCSCKDDLVAAHKQCAEAWFKIKGNKTCEICGSIARNVTGAFEVETVEQWNESNDASMAAPTGPAPSHGENRSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1193 218 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 154 IPR013083 -
Lele28g1193 218 ProSiteProfiles Zinc finger RING-CH-type profile. 87 152 IPR011016 GO:0008270
Lele28g1193 218 PANTHER ZINC FINGER, RING-CH-TYPE 37 217 - -
Lele28g1193 218 SMART ringv_2 94 146 IPR011016 GO:0008270
Lele28g1193 218 Pfam RING-variant domain 95 145 IPR011016 GO:0008270
Lele28g1193 218 SUPERFAMILY RING/U-box 90 148 - -
Lele28g1193 218 CDD RING_CH-C4HC3_MARCH 95 146 - -
Lele28g1193 218 MobiDBLite consensus disorder prediction 20 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1193 Lele-ChrLele28 7786179 7788280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1193 41 218 C3H Transcription Factor Family AT5G05830 60.894 3.50e-69 209