Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1191 ATGAAAATATCTAAAATAATGAACCAATCTGCAGAAATAAAAAAATTCAGAACGAAGCAGCAAAACCCAATCGAAACCGTTCTGGCTCTGAGTCACCGCGCTCTGCAAGTTCACGCGCCAACTTGTGAGAAATTTGACTGTAAAACCGGAGAAATACTCACTCTGGCTGTCATTAGTTGTACATCGGTGGCGGAGGAAGGGCAAGTGGGTGCGCCGCTTCTGTCGTCACCGGCACAAGAGCGAATTTCCACGACCATGCCTAACTTTGAGGGTAATCCGCAGAAGCTGCGCGATGATGGAGCTGCAGATGTGGAAATGCCCGACACCGCTCACCAGATTAGCCGAGATTCATGGTTTCAAGTGGGTTTTGTTCTCACCACCGGAATCAACAGCGCATATGTACTTGGATACTCTGGTACCATCATGGTTCCCCTCGGTTGGATATATGGTGTGGTTGGTTTAATTGCTGCTACCGCAATATCATTGTATGCAAATTCCCTTATTGCCAAGCTCCATGAGTTTGGAGGAAAGAGGCATATAAGGTACAGGGATCTTGCTGGATATATATACGGTAGGAAGGCATATTCTCTTACATGGGCGCTGCAGTATGTCAATCTTTTCATGATAAATACTGGCTATATCATTTTGGCTGGTTCTGCACTAAAGGCCGTATATGTTCTGTTTAGGGATGATCATCAAATGAAGCTCCCATATTTTATTGCCATAGCAGGATTCATGTGTGCAATGTTTGCTGTATGCATTCCCCATCTTTCAGCTCTTAGAGTTTGGCTGGGATTTTCAACAGTCTTCAGCCTAATATATATTGCAACAGCTTTTGCGTTGTCGCTTAAAGATGGTTTGAAATCACCGGCTCGAGATTATAGCATCCCCGGTTCAACAAGAAGTAAAATATTTACAACAATTGGAGCGTCTGCTAATCTTGTATTTGCATATAATACAGGAATGCTTCCCGAGATACAGGCAACTATCCGGCAGCCGGTAGTCAAGAACATGATGAAAGCCCTATATTTCCAATTTACTGTTGGAGTTGCACCTCTTTATTTGGTTACCTTTACAGGGTATTGGGCTTATGGATCTTCCACATCATCCTATTTGCTGAGTAACGTGAATGGTCCAGTCTGGTTGAAGGCCACGGCCAACATTGCTGCCTTTTTGCAGTCAGTCATCGCATTGCACATATTTGCAAGTCCAATGTATGAGTATTTGGATACTAGATATGGTATCACAGGAAGCGCGTTGGCTCCTAAGAACTTGTCATTTCGAGTTCTGGTAAGGGGTGGCTACCTGGCCTTCAATACATTTGTGTCTGCTCTCCTGCCTTTCCTTGGAGATTTCATGAGCCTCACAGGAGCTATAAGCACATTTCCTCTGACATTTATACTGGCGAATCATATGTATTTAGTGGCAAAGAAGAACAAACTAACGTCCTTACAAAAGCTCTGGCACTGGTTCAATGTTTGTTTCTTTGGCATCATGTCTGTTGCTGCAGCAATTGCAGCACTACGGCTCATTGCTGTTGATTCCAAAACGTACAATCTCTTTGCTGATTTATGA 1575 0.4368 MKISKIMNQSAEIKKFRTKQQNPIETVLALSHRALQVHAPTCEKFDCKTGEILTLAVISCTSVAEEGQVGAPLLSSPAQERISTTMPNFEGNPQKLRDDGAADVEMPDTAHQISRDSWFQVGFVLTTGINSAYVLGYSGTIMVPLGWIYGVVGLIAATAISLYANSLIAKLHEFGGKRHIRYRDLAGYIYGRKAYSLTWALQYVNLFMINTGYIILAGSALKAVYVLFRDDHQMKLPYFIAIAGFMCAMFAVCIPHLSALRVWLGFSTVFSLIYIATAFALSLKDGLKSPARDYSIPGSTRSKIFTTIGASANLVFAYNTGMLPEIQATIRQPVVKNMMKALYFQFTVGVAPLYLVTFTGYWAYGSSTSSYLLSNVNGPVWLKATANIAAFLQSVIALHIFASPMYEYLDTRYGITGSALAPKNLSFRVLVRGGYLAFNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLVAKKNKLTSLQKLWHWFNVCFFGIMSVAAAIAALRLIAVDSKTYNLFADL 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1191 524 PANTHER OS05G0424000 PROTEIN-RELATED 115 506 - -
Lele28g1191 524 Pfam Transmembrane amino acid transporter protein 115 507 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1191 Lele-ChrLele28 7765905 7769049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1191 142 524 Organic Solute Cotransporters AT2G39890 77.023 0.0 621
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1191 25 7843674 7846567 Lele28g1191 28 7765905 7769049 CCT
Lele28g1191 28 7765905 7769049 Lele26g1198 26 7794100 7795517 CCT
Lele28g1191 28 7765905 7769049 Lele28g1190 28 7765063 7765373 CCT
Lele25g1185 25 7800085 7803831 Lele28g1191 28 7765905 7769049 CCT
Lele28g1191 28 7765905 7769049 Lele28g1191 28 7765905 7769049 ECH
Lele25g1191 25 7843674 7846567 Lele28g1191 28 7765905 7769049 hybridization
Lele26g1199 26 7796049 7799656 Lele28g1191 28 7765905 7769049 hybridization